Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAM1L1Q8N609 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 FAM99A-202ENST00000538190 1989 ntBASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAM1L1Q8N609 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAM1L1Q8N609 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAM1L1Q8N609 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 KRT87P-202ENST00000534226 1464 ntBASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAM1L1Q8N609 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 AL162430.1-201ENST00000480705 870 ntBASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAM1L1Q8N609 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 C11orf96-202ENST00000528572 1834 ntBASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAM1L1Q8N609 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms