Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 MIR4767-201ENST00000582827 78 ntBASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00346Q8IVM7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 AP005435.1-201ENST00000529293 1178 ntBASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 AC024257.2-201ENST00000549699 147 ntBASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 AL136162.1-201ENST00000607711 1078 ntBASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 AC008406.3-201ENST00000620001 1374 ntBASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00346Q8IVM7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00346Q8IVM7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00346Q8IVM7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00346Q8IVM7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00346Q8IVM7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00346Q8IVM7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 AP004607.7-201ENST00000527152 1677 ntBASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 Z98882.1-201ENST00000622160 2253 ntBASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00346Q8IVM7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 AC135279.3-201ENST00000610945 1311 ntBASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 BX842568.3-201ENST00000418104 571 ntBASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 AC005229.4-201ENST00000610085 2198 ntBASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC00346Q8IVM7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms