Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 AF106564.1-201ENST00000607058 2553 ntBASIC21.28■■□□□ 1
ZC3HC1Q86WB0 AP004607.7-201ENST00000527152 1677 ntBASIC21.28■■□□□ 1
ZC3HC1Q86WB0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3HC1Q86WB0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3HC1Q86WB0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3HC1Q86WB0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3HC1Q86WB0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3HC1Q86WB0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 AC003102.1-202ENST00000563394 1796 ntBASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZC3HC1Q86WB0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 BX842568.3-201ENST00000418104 571 ntBASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 MIR4767-201ENST00000582827 78 ntBASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3HC1Q86WB0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 UNC93B3-201ENST00000308076 687 ntBASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 AL024507.2-201ENST00000606070 2574 ntBASIC21.22■□□□□ 0.99
ZC3HC1Q86WB0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 AC133561.4-201ENST00000566112 224 ntBASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3HC1Q86WB0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
ZC3HC1Q86WB0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ZC3HC1Q86WB0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms