Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AC011298.3-201ENST00000615796 283 ntBASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 AL355001.2-201ENST00000620617 1191 ntBASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR3Q6ZTQ4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDHR3Q6ZTQ4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.45■■□□□ 1.03
CDHR3Q6ZTQ4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 pRNA.6-201ENST00000610482 90 ntBASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 pRNA.5-201ENST00000612139 90 ntBASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 pRNA.11-201ENST00000618423 90 ntBASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 pRNA.13-201ENST00000619112 90 ntBASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDHR3Q6ZTQ4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR3Q6ZTQ4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR3Q6ZTQ4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR3Q6ZTQ4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR3Q6ZTQ4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDHR3Q6ZTQ4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 AP001330.3-201ENST00000520123 633 ntBASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 AF213884.3-201ENST00000563833 479 ntBASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 AC136469.2-201ENST00000623944 1028 ntBASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 AL157384.1-201ENST00000445995 2473 ntBASIC21.43■■□□□ 1.02
CDHR3Q6ZTQ4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 AL136967.2-201ENST00000623968 743 ntBASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms