Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD3Q6STE5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD3Q6STE5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 GUSBP5-201ENST00000418136 578 ntBASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 OR2I1P-207ENST00000453522 948 ntBASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD3Q6STE5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 SRD5A1P1-201ENST00000442297 786 ntBASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 AC092171.4-201ENST00000609130 632 ntBASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 SLC25A24-204ENST00000569674 2357 ntBASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD3Q6STE5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 AC087239.1-201ENST00000622671 572 ntBASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD3Q6STE5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SMARCD3Q6STE5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SMARCD3Q6STE5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms