Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 DUX4L19-201ENST00000557448 1267 ntBASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM53Q6P2H8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 LETM1P2-201ENST00000597330 2178 ntBASIC19.42■□□□□ 0.7
TMEM53Q6P2H8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM53Q6P2H8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 AC026310.3-201ENST00000625186 2373 ntBASIC19.4■□□□□ 0.7
TMEM53Q6P2H8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.39■□□□□ 0.7
TMEM53Q6P2H8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
TMEM53Q6P2H8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM53Q6P2H8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM53Q6P2H8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 AC006455.2-201ENST00000429931 906 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 pRNA.6-201ENST00000610482 90 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 pRNA.5-201ENST00000612139 90 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 pRNA.11-201ENST00000618423 90 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 pRNA.13-201ENST00000619112 90 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 SYT6-210ENST00000641643 1587 ntBASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM53Q6P2H8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms