Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 LINC01023-201ENST00000606054 436 ntBASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCRAQ6ISU1 AC022211.4-201ENST00000625094 2161 ntBASIC22.33■■□□□ 1.16
PTCRAQ6ISU1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PTCRAQ6ISU1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
PTCRAQ6ISU1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PTCRAQ6ISU1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCRAQ6ISU1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 KRT18P21-201ENST00000515767 1272 ntBASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCRAQ6ISU1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 EEF1DP3-203ENST00000566025 782 ntBASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCRAQ6ISU1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTCRAQ6ISU1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 SNORA78-201ENST00000459373 127 ntBASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 RPPH1-201ENST00000516869 333 ntBASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCRAQ6ISU1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 AC053503.5-201ENST00000601508 636 ntBASIC22.27■■□□□ 1.16
PTCRAQ6ISU1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PTCRAQ6ISU1 LINC00543-201ENST00000567234 1845 ntBASIC22.27■■□□□ 1.15
PTCRAQ6ISU1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCRAQ6ISU1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.26■■□□□ 1.15
PTCRAQ6ISU1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCRAQ6ISU1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms