Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 OR7E47P-201ENST00000546390 1422 ntBASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 AL033527.3-201ENST00000566366 1196 ntBASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00242Q5T6M2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 MTDHP2-201ENST00000601468 714 ntBASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 OXCT2P1-201ENST00000447263 1535 ntBASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00242Q5T6M2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00242Q5T6M2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LINC00242Q5T6M2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00242Q5T6M2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms