Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 AC126177.7-201ENST00000547904 679 ntBASIC10.71□□□□□ -0.69
LINC01554Q52M75 CHST11-203ENST00000547956 936 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01554Q52M75 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
LINC01554Q52M75 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
LINC01554Q52M75 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
LINC01554Q52M75 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01554Q52M75 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.7□□□□□ -0.7
LINC01554Q52M75 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01554Q52M75 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC01554Q52M75 AL513477.1-201ENST00000602865 2407 ntBASIC10.69□□□□□ -0.7
LINC01554Q52M75 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 HLA-V-202ENST00000446817 847 ntBASIC10.69□□□□□ -0.7
LINC01554Q52M75 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 AP003733.4-201ENST00000623785 1697 ntBASIC10.69□□□□□ -0.7
LINC01554Q52M75 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01554Q52M75 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
LINC01554Q52M75 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms