Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PTPN20Q4JDL3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 BX005040.4-201ENST00000637145 1518 ntBASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 IRS3P-201ENST00000223076 1006 ntBASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 MIR6084-201ENST00000622012 110 ntBASIC22.58■■□□□ 1.21
PTPN20Q4JDL3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
PTPN20Q4JDL3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PTPN20Q4JDL3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PTPN20Q4JDL3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PTPN20Q4JDL3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 ZNRF2P3-201ENST00000424200 374 ntBASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 AL354811.1-201ENST00000610286 706 ntBASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.57■■□□□ 1.2
PTPN20Q4JDL3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PTPN20Q4JDL3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 AL358852.1-201ENST00000623174 1268 ntBASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 AC003102.1-202ENST00000563394 1796 ntBASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTPN20Q4JDL3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 AC005224.4-201ENST00000583262 1652 ntBASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 AC009237.3-201ENST00000393279 1427 ntBASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTPN20Q4JDL3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 AC055733.4-201ENST00000638462 1354 ntBASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 TPRG1LP1-201ENST00000598702 760 ntBASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTPN20Q4JDL3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms