Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.22■□□□□ 0.99
SF3A2Q15428 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SF3A2Q15428 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.22■□□□□ 0.99
SF3A2Q15428 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SF3A2Q15428 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
SF3A2Q15428 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.22■□□□□ 0.99
SF3A2Q15428 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.22■□□□□ 0.99
SF3A2Q15428 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.22■□□□□ 0.99
SF3A2Q15428 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SF3A2Q15428 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 AC093787.1-201ENST00000450396 207 ntBASIC21.22■□□□□ 0.99
SF3A2Q15428 AC092118.2-201ENST00000613495 667 ntBASIC21.22■□□□□ 0.99
SF3A2Q15428 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.22■□□□□ 0.99
SF3A2Q15428 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SF3A2Q15428 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SF3A2Q15428 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.21■□□□□ 0.99
SF3A2Q15428 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SF3A2Q15428 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.21■□□□□ 0.99
SF3A2Q15428 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.21■□□□□ 0.99
SF3A2Q15428 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SF3A2Q15428 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.21■□□□□ 0.99
SF3A2Q15428 TERF1P5-201ENST00000477545 1207 ntBASIC21.21■□□□□ 0.99
SF3A2Q15428 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.21■□□□□ 0.99
SF3A2Q15428 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
SF3A2Q15428 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.21■□□□□ 0.99
SF3A2Q15428 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.21■□□□□ 0.99
SF3A2Q15428 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SF3A2Q15428 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SF3A2Q15428 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SF3A2Q15428 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SF3A2Q15428 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SF3A2Q15428 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.2■□□□□ 0.98
SF3A2Q15428 AL353803.4-201ENST00000565882 1934 ntBASIC21.2■□□□□ 0.98
SF3A2Q15428 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.2■□□□□ 0.98
SF3A2Q15428 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.2■□□□□ 0.98
SF3A2Q15428 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SF3A2Q15428 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.2■□□□□ 0.98
SF3A2Q15428 AC016405.3-201ENST00000607710 860 ntBASIC21.2■□□□□ 0.98
SF3A2Q15428 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.2■□□□□ 0.98
SF3A2Q15428 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SF3A2Q15428 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SF3A2Q15428 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
SF3A2Q15428 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SF3A2Q15428 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SF3A2Q15428 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SF3A2Q15428 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SF3A2Q15428 BX276092.2-201ENST00000417668 665 ntBASIC21.19■□□□□ 0.98
SF3A2Q15428 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.19■□□□□ 0.98
SF3A2Q15428 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
SF3A2Q15428 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.19■□□□□ 0.98
SF3A2Q15428 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.19■□□□□ 0.98
SF3A2Q15428 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SF3A2Q15428 AC138907.5-202ENST00000569484 235 ntBASIC21.19■□□□□ 0.98
SF3A2Q15428 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.19■□□□□ 0.98
SF3A2Q15428 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SF3A2Q15428 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SF3A2Q15428 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.18■□□□□ 0.98
SF3A2Q15428 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 AC128676.1-201ENST00000454392 318 ntBASIC21.18■□□□□ 0.98
SF3A2Q15428 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.18■□□□□ 0.98
SF3A2Q15428 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.18■□□□□ 0.98
SF3A2Q15428 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 OR10C1-204ENST00000622521 1039 ntBASIC21.18■□□□□ 0.98
SF3A2Q15428 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 AC055733.4-201ENST00000638462 1354 ntBASIC21.18■□□□□ 0.98
SF3A2Q15428 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.18■□□□□ 0.98
SF3A2Q15428 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.18■□□□□ 0.98
SF3A2Q15428 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SF3A2Q15428 DUSP8P5-201ENST00000422884 1815 ntBASIC21.18■□□□□ 0.98
SF3A2Q15428 LINC00543-201ENST00000567234 1845 ntBASIC21.18■□□□□ 0.98
SF3A2Q15428 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SF3A2Q15428 UNC93B4-201ENST00000505679 747 ntBASIC21.17■□□□□ 0.98
SF3A2Q15428 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.17■□□□□ 0.98
SF3A2Q15428 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.17■□□□□ 0.98
SF3A2Q15428 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.17■□□□□ 0.98
SF3A2Q15428 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.17■□□□□ 0.98
SF3A2Q15428 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms