Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 USE1YGL098W 738 nt3.44□□□□□ -1.86
TY1B-DR1Q03855 RPC34YNR003C 954 nt3.44□□□□□ -1.86
TY1B-DR1Q03855 SRB8YCR081W 4284 nt3.44□□□□□ -1.86
TY1B-DR1Q03855 RAD7YJR052W 1698 nt3.44□□□□□ -1.86
TY1B-DR1Q03855 RRP12YPL012W 3687 nt3.44□□□□□ -1.86
TY1B-DR1Q03855 YCR064CYCR064C 411 nt3.43□□□□□ -1.86
TY1B-DR1Q03855 CST9YLR394W 1449 nt3.43□□□□□ -1.86
TY1B-DR1Q03855 FRE4YNR060W 2160 nt3.43□□□□□ -1.86
TY1B-DR1Q03855 ENT1YDL161W 1365 nt3.43□□□□□ -1.86
TY1B-DR1Q03855 ROM1YGR070W 3468 nt3.43□□□□□ -1.86
TY1B-DR1Q03855 PEX6YNL329C 3093 nt3.42□□□□□ -1.86
TY1B-DR1Q03855 RPC17YJL011C 486 nt3.42□□□□□ -1.86
TY1B-DR1Q03855 YJR098CYJR098C 1971 nt3.41□□□□□ -1.86
TY1B-DR1Q03855 SIN4YNL236W 2925 nt3.41□□□□□ -1.86
TY1B-DR1Q03855 NOP13YNL175C 1212 nt3.41□□□□□ -1.86
TY1B-DR1Q03855 SPO14YKR031C 5052 nt3.41□□□□□ -1.86
TY1B-DR1Q03855 YAL059C-AYAL059C-A 423 nt3.4□□□□□ -1.86
TY1B-DR1Q03855 TAF3YPL011C 1062 nt3.4□□□□□ -1.86
TY1B-DR1Q03855 CIN1YOR349W 3045 nt3.4□□□□□ -1.86
TY1B-DR1Q03855 PDC2YDR081C 2778 nt3.4□□□□□ -1.87
TY1B-DR1Q03855 ECO1YFR027W 846 nt3.4□□□□□ -1.87
TY1B-DR1Q03855 GAB1YLR459W 1185 nt3.4□□□□□ -1.87
TY1B-DR1Q03855 IRC8YJL051W 2469 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 TEL1YBL088C 8364 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 DIS3YOL021C 3006 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 SPO73YER046W 432 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 GEP4YHR100C 558 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 PPT2YPL148C 522 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 SVL3YPL032C 2478 nt3.39□□□□□ -1.87
TY1B-DR1Q03855 MET14YKL001C 609 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 ATG17YLR423C 1254 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 YMR030W-AYMR030W-A 291 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 PEX8YGR077C 1770 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 OPT2YPR194C 2634 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 DUG2YBR281C 2637 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 NUP100YKL068W 2880 nt3.38□□□□□ -1.87
TY1B-DR1Q03855 HSH155YMR288W 2916 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 FAR1YJL157C 2493 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 TAF12YDR145W 1620 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 SSD1YDR293C 3753 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 DOA4YDR069C 2781 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 MNR2YKL064W 2910 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 SIR4YDR227W 4077 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 ERG25YGR060W 930 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 Q0010Q0010 387 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 SRP68YPL243W 1800 nt3.37□□□□□ -1.87
TY1B-DR1Q03855 NEO1YIL048W 3456 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 YER039C-AYER039C-A 219 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 RPL27AYHR010W 411 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 YLR122CYLR122C 378 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 TAF4YMR005W 1167 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 TRI1YMR233W 681 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 SIP3YNL257C 3690 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 VPS13YLL040C 9435 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 TFC3YAL001C 3483 nt3.36□□□□□ -1.87
TY1B-DR1Q03855 YLR125WYLR125W 411 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 TMC1YOR052C 453 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 ESL1YIL151C 3357 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 HPR1YDR138W 2259 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 VAC14YLR386W 2643 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 SEG1YMR086W 2883 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 YBR139WYBR139W 1527 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 SLM2YNL047C 1971 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 SSK2YNR031C 4740 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 snR17asnR17a 333 nt3.35□□□□□ -1.87
TY1B-DR1Q03855 RRP5YMR229C 5190 nt3.34□□□□□ -1.87
TY1B-DR1Q03855 REB1YBR049C 2433 nt3.34□□□□□ -1.87
TY1B-DR1Q03855 BET1YIL004C 429 nt3.34□□□□□ -1.87
TY1B-DR1Q03855 SYS1YJL004C 612 nt3.34□□□□□ -1.87
TY1B-DR1Q03855 YIL092WYIL092W 1902 nt3.34□□□□□ -1.88
TY1B-DR1Q03855 KRE33YNL132W 3171 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 YER079C-AYER079C-A 339 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 SWC7YLR385C 399 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 RAS1YOR101W 930 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 SAS5YOR213C 747 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 MSS18YPR134W 807 nt3.33□□□□□ -1.88
TY1B-DR1Q03855 CDH1YGL003C 1701 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 PUF6YDR496C 1971 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 BNR1YIL159W 4128 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 YDR535CYDR535C 501 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 MF(ALPHA)1YPL187W 498 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 SFB2YNL049C 2631 nt3.32□□□□□ -1.88
TY1B-DR1Q03855 YOL098CYOL098C 3114 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 RPS23AYGR118W 438 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 YBL065WYBL065W 345 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 RPS23BYPR132W 438 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 POL30YBR088C 777 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 SSF2YDR312W 1362 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 YHR177WYHR177W 1362 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 SSN2YDR443C 4263 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 GIP1YBR045C 1920 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 DCP2YNL118C 2913 nt3.31□□□□□ -1.88
TY1B-DR1Q03855 YER133W-AYER133W-A 342 nt3.3□□□□□ -1.88
TY1B-DR1Q03855 UNG1YML021C 1080 nt3.3□□□□□ -1.88
TY1B-DR1Q03855 SKM1YOL113W 1968 nt3.3□□□□□ -1.88
TY1B-DR1Q03855 REV3YPL167C 4515 nt3.3□□□□□ -1.88
TY1B-DR1Q03855 PBA1YLR199C 831 nt3.3□□□□□ -1.88
TY1B-DR1Q03855 NUP159YIL115C 4383 nt3.29□□□□□ -1.88
TY1B-DR1Q03855 TAE2YPL009C 3117 nt3.29□□□□□ -1.88
TY1B-DR1Q03855 YBL005W-AYBL005W-A 1323 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms