Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
H3F3AP84243 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H3F3AP84243 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.15■□□□□ 0.66
H3F3AP84243 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.15■□□□□ 0.66
H3F3AP84243 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.15■□□□□ 0.66
H3F3AP84243 AC123595.1-201ENST00000440769 1046 ntBASIC19.15■□□□□ 0.66
H3F3AP84243 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
H3F3AP84243 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.15■□□□□ 0.66
H3F3AP84243 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.15■□□□□ 0.66
H3F3AP84243 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H3F3AP84243 AC055733.4-201ENST00000638462 1354 ntBASIC19.15■□□□□ 0.66
H3F3AP84243 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H3F3AP84243 AP006587.3-201ENST00000525742 1516 ntBASIC19.15■□□□□ 0.66
H3F3AP84243 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
H3F3AP84243 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H3F3AP84243 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
H3F3AP84243 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H3F3AP84243 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H3F3AP84243 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H3F3AP84243 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.14■□□□□ 0.65
H3F3AP84243 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.14■□□□□ 0.65
H3F3AP84243 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
H3F3AP84243 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.14■□□□□ 0.65
H3F3AP84243 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H3F3AP84243 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
H3F3AP84243 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H3F3AP84243 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
H3F3AP84243 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H3F3AP84243 YBX1P1-201ENST00000445822 960 ntBASIC19.13■□□□□ 0.65
H3F3AP84243 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.13■□□□□ 0.65
H3F3AP84243 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.13■□□□□ 0.65
H3F3AP84243 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.13■□□□□ 0.65
H3F3AP84243 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.13■□□□□ 0.65
H3F3AP84243 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H3F3AP84243 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H3F3AP84243 AC026471.6-201ENST00000622954 1905 ntBASIC19.13■□□□□ 0.65
H3F3AP84243 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.13■□□□□ 0.65
H3F3AP84243 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H3F3AP84243 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H3F3AP84243 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
H3F3AP84243 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
H3F3AP84243 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
H3F3AP84243 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.12■□□□□ 0.65
H3F3AP84243 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.12■□□□□ 0.65
H3F3AP84243 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.12■□□□□ 0.65
H3F3AP84243 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
H3F3AP84243 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.12■□□□□ 0.65
H3F3AP84243 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.12■□□□□ 0.65
H3F3AP84243 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.12■□□□□ 0.65
H3F3AP84243 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
H3F3AP84243 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
H3F3AP84243 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 CLDN5-201ENST00000403084 2357 ntBASIC19.11■□□□□ 0.65
H3F3AP84243 LINC02228-203ENST00000641970 1355 ntBASIC19.11■□□□□ 0.65
H3F3AP84243 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
H3F3AP84243 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.11■□□□□ 0.65
H3F3AP84243 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.11■□□□□ 0.65
H3F3AP84243 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.11■□□□□ 0.65
H3F3AP84243 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
H3F3AP84243 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H3F3AP84243 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.11■□□□□ 0.65
H3F3AP84243 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
H3F3AP84243 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.1■□□□□ 0.65
H3F3AP84243 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H3F3AP84243 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H3F3AP84243 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.1■□□□□ 0.65
H3F3AP84243 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H3F3AP84243 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H3F3AP84243 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
H3F3AP84243 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
H3F3AP84243 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
H3F3AP84243 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
H3F3AP84243 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.09■□□□□ 0.65
H3F3AP84243 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.09■□□□□ 0.65
H3F3AP84243 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms