Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL138724.1-201ENST00000606771 1088 ntBASIC18.61■□□□□ 0.57
SEC61A1P61619 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.61■□□□□ 0.57
SEC61A1P61619 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A1P61619 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A1P61619 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SEC61A1P61619 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.6■□□□□ 0.57
SEC61A1P61619 ZNRF2P3-201ENST00000424200 374 ntBASIC18.6■□□□□ 0.57
SEC61A1P61619 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.6■□□□□ 0.57
SEC61A1P61619 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.6■□□□□ 0.57
SEC61A1P61619 AL136967.2-201ENST00000623968 743 ntBASIC18.6■□□□□ 0.57
SEC61A1P61619 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SEC61A1P61619 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SEC61A1P61619 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61A1P61619 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.59■□□□□ 0.57
SEC61A1P61619 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SEC61A1P61619 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SEC61A1P61619 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 MIR939-201ENST00000401314 82 ntBASIC18.59■□□□□ 0.57
SEC61A1P61619 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.59■□□□□ 0.57
SEC61A1P61619 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SEC61A1P61619 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.59■□□□□ 0.57
SEC61A1P61619 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC61A1P61619 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.59■□□□□ 0.57
SEC61A1P61619 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SEC61A1P61619 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SEC61A1P61619 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SEC61A1P61619 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SEC61A1P61619 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC61A1P61619 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC61A1P61619 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC61A1P61619 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.58■□□□□ 0.56
SEC61A1P61619 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC61A1P61619 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.58■□□□□ 0.56
SEC61A1P61619 AC136469.2-201ENST00000623944 1028 ntBASIC18.58■□□□□ 0.56
SEC61A1P61619 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC61A1P61619 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.58■□□□□ 0.56
SEC61A1P61619 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.58■□□□□ 0.56
SEC61A1P61619 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC61A1P61619 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SEC61A1P61619 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SEC61A1P61619 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SEC61A1P61619 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC61A1P61619 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.57■□□□□ 0.56
SEC61A1P61619 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.57■□□□□ 0.56
SEC61A1P61619 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEC61A1P61619 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC61A1P61619 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC61A1P61619 AC008764.7-201ENST00000593779 1081 ntBASIC18.57■□□□□ 0.56
SEC61A1P61619 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SEC61A1P61619 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC61A1P61619 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEC61A1P61619 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEC61A1P61619 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC61A1P61619 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SEC61A1P61619 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms