Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM258P61165 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM258P61165 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM258P61165 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM258P61165 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM258P61165 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM258P61165 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TMEM258P61165 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TMEM258P61165 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 AC011270.2-201ENST00000624293 2550 ntBASIC12.93□□□□□ -0.34
TMEM258P61165 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TMEM258P61165 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM258P61165 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM258P61165 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM258P61165 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM258P61165 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM258P61165 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM258P61165 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM258P61165 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM258P61165 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM258P61165 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM258P61165 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM258P61165 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TMEM258P61165 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM258P61165 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 FAM99A-202ENST00000538190 1989 ntBASIC12.91□□□□□ -0.34
TMEM258P61165 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
TMEM258P61165 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM258P61165 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM258P61165 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM258P61165 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM258P61165 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms