Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ZC3H6P61129 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
ZC3H6P61129 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
ZC3H6P61129 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
ZC3H6P61129 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
ZC3H6P61129 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
ZC3H6P61129 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC28.88■■■□□ 2.21
ZC3H6P61129 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC28.88■■■□□ 2.21
ZC3H6P61129 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
ZC3H6P61129 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC28.88■■■□□ 2.21
ZC3H6P61129 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.88■■■□□ 2.21
ZC3H6P61129 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.88■■■□□ 2.21
ZC3H6P61129 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
ZC3H6P61129 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H6P61129 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZC3H6P61129 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
ZC3H6P61129 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
ZC3H6P61129 ESRRAP1-201ENST00000400596 1257 ntBASIC28.87■■■□□ 2.21
ZC3H6P61129 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.87■■■□□ 2.21
ZC3H6P61129 AL512625.2-201ENST00000417533 625 ntBASIC28.87■■■□□ 2.21
ZC3H6P61129 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.87■■■□□ 2.21
ZC3H6P61129 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC28.87■■■□□ 2.21
ZC3H6P61129 AC008694.1-202ENST00000636953 945 ntBASIC28.87■■■□□ 2.21
ZC3H6P61129 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZC3H6P61129 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.87■■■□□ 2.21
ZC3H6P61129 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.86■■■□□ 2.21
ZC3H6P61129 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.86■■■□□ 2.21
ZC3H6P61129 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
ZC3H6P61129 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H6P61129 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H6P61129 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H6P61129 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H6P61129 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC28.85■■■□□ 2.21
ZC3H6P61129 GCSHP5-201ENST00000443090 522 ntBASIC28.85■■■□□ 2.21
ZC3H6P61129 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC28.85■■■□□ 2.21
ZC3H6P61129 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.85■■■□□ 2.21
ZC3H6P61129 ADM-205ENST00000528544 586 ntTSL 2 BASIC28.85■■■□□ 2.21
ZC3H6P61129 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.85■■■□□ 2.21
ZC3H6P61129 AC053503.5-201ENST00000601508 636 ntBASIC28.85■■■□□ 2.21
ZC3H6P61129 AC069236.1-201ENST00000604339 616 ntBASIC28.85■■■□□ 2.21
ZC3H6P61129 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H6P61129 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.84■■■□□ 2.21
ZC3H6P61129 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
ZC3H6P61129 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H6P61129 RHEB-204ENST00000472642 900 ntTSL 3 BASIC28.84■■■□□ 2.21
ZC3H6P61129 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H6P61129 MYC-209ENST00000641252 345 ntBASIC28.84■■■□□ 2.21
ZC3H6P61129 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H6P61129 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.84■■■□□ 2.21
ZC3H6P61129 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H6P61129 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H6P61129 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ZC3H6P61129 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H6P61129 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC28.83■■■□□ 2.21
ZC3H6P61129 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ZC3H6P61129 OR7E47P-201ENST00000546390 1422 ntBASIC28.83■■■□□ 2.21
ZC3H6P61129 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.83■■■□□ 2.21
ZC3H6P61129 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H6P61129 ANOS2P-203ENST00000472227 1816 ntBASIC28.83■■■□□ 2.21
ZC3H6P61129 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.83■■■□□ 2.2
ZC3H6P61129 LINC00526-201ENST00000581067 1875 ntBASIC28.83■■■□□ 2.2
ZC3H6P61129 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
ZC3H6P61129 BET1L-207ENST00000529614 560 ntTSL 5 BASIC28.82■■■□□ 2.2
ZC3H6P61129 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.82■■■□□ 2.2
ZC3H6P61129 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC28.82■■■□□ 2.2
ZC3H6P61129 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.82■■■□□ 2.2
ZC3H6P61129 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
ZC3H6P61129 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ZC3H6P61129 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ZC3H6P61129 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ZC3H6P61129 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.81■■■□□ 2.2
ZC3H6P61129 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ZC3H6P61129 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC28.81■■■□□ 2.2
ZC3H6P61129 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ZC3H6P61129 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZC3H6P61129 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZC3H6P61129 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC28.8■■■□□ 2.2
ZC3H6P61129 AL158047.1-201ENST00000445918 881 ntBASIC28.8■■■□□ 2.2
ZC3H6P61129 AC097658.1-201ENST00000475555 843 ntBASIC28.8■■■□□ 2.2
ZC3H6P61129 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.8■■■□□ 2.2
ZC3H6P61129 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.8■■■□□ 2.2
ZC3H6P61129 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.8■■■□□ 2.2
ZC3H6P61129 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.8■■■□□ 2.2
ZC3H6P61129 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZC3H6P61129 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms