Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH12P55289 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH12P55289 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH12P55289 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH12P55289 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH12P55289 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH12P55289 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH12P55289 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH12P55289 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH12P55289 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH12P55289 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH12P55289 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH12P55289 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH12P55289 SRD5A1P1-201ENST00000442297 786 ntBASIC19.88■□□□□ 0.77
CDH12P55289 AL356441.2-201ENST00000443009 864 ntBASIC19.88■□□□□ 0.77
CDH12P55289 AL512631.2-201ENST00000604634 923 ntBASIC19.88■□□□□ 0.77
CDH12P55289 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CDH12P55289 FEM1AP4-201ENST00000443167 1987 ntBASIC19.88■□□□□ 0.77
CDH12P55289 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH12P55289 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH12P55289 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH12P55289 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDH12P55289 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CDH12P55289 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH12P55289 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH12P55289 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
CDH12P55289 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH12P55289 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH12P55289 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH12P55289 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH12P55289 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDH12P55289 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CDH12P55289 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.86■□□□□ 0.77
CDH12P55289 MIR3181-201ENST00000578512 73 ntBASIC19.86■□□□□ 0.77
CDH12P55289 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH12P55289 AL031602.1-201ENST00000633169 911 ntBASIC19.86■□□□□ 0.77
CDH12P55289 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH12P55289 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH12P55289 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH12P55289 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH12P55289 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH12P55289 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH12P55289 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH12P55289 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH12P55289 AC026471.6-201ENST00000622954 1905 ntBASIC19.84■□□□□ 0.77
CDH12P55289 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDH12P55289 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDH12P55289 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH12P55289 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH12P55289 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH12P55289 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH12P55289 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH12P55289 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH12P55289 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH12P55289 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms