Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CLCN2P51788 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
CLCN2P51788 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN2P51788 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN2P51788 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CLCN2P51788 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN2P51788 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN2P51788 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN2P51788 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN2P51788 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN2P51788 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLCN2P51788 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.64■□□□□ 0.89
CLCN2P51788 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLCN2P51788 AC008764.7-201ENST00000593779 1081 ntBASIC20.64■□□□□ 0.89
CLCN2P51788 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN2P51788 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN2P51788 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN2P51788 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.64■□□□□ 0.89
CLCN2P51788 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLCN2P51788 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN2P51788 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 BX842568.3-201ENST00000418104 571 ntBASIC20.63■□□□□ 0.89
CLCN2P51788 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCN2P51788 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCN2P51788 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN2P51788 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLCN2P51788 RASA4CP-201ENST00000424092 1398 ntBASIC20.62■□□□□ 0.89
CLCN2P51788 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN2P51788 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.62■□□□□ 0.89
CLCN2P51788 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 AC233992.3-201ENST00000607491 485 ntBASIC20.62■□□□□ 0.89
CLCN2P51788 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN2P51788 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLCN2P51788 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN2P51788 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN2P51788 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN2P51788 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLCN2P51788 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN2P51788 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN2P51788 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CLCN2P51788 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CLCN2P51788 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN2P51788 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN2P51788 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCN2P51788 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 AC099791.1-201ENST00000416440 715 ntBASIC20.6■□□□□ 0.89
CLCN2P51788 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.6■□□□□ 0.89
CLCN2P51788 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
CLCN2P51788 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN2P51788 AC087742.1-201ENST00000575880 1738 ntBASIC20.6■□□□□ 0.89
CLCN2P51788 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCN2P51788 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN2P51788 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN2P51788 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLCN2P51788 AC005229.4-201ENST00000610085 2198 ntBASIC20.59■□□□□ 0.89
CLCN2P51788 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 AC010542.4-201ENST00000563151 1910 ntBASIC20.59■□□□□ 0.89
CLCN2P51788 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CLCN2P51788 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 CA15P2-201ENST00000611168 834 ntBASIC20.59■□□□□ 0.89
CLCN2P51788 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CLCN2P51788 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCN2P51788 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN2P51788 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLCN2P51788 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CLCN2P51788 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms