Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCR9P51686 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCR9P51686 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.8■□□□□ 0.6
CCR9P51686 pRNA.6-201ENST00000610482 90 ntBASIC18.8■□□□□ 0.6
CCR9P51686 pRNA.5-201ENST00000612139 90 ntBASIC18.8■□□□□ 0.6
CCR9P51686 pRNA.11-201ENST00000618423 90 ntBASIC18.8■□□□□ 0.6
CCR9P51686 pRNA.13-201ENST00000619112 90 ntBASIC18.8■□□□□ 0.6
CCR9P51686 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.8■□□□□ 0.6
CCR9P51686 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCR9P51686 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCR9P51686 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCR9P51686 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.79■□□□□ 0.6
CCR9P51686 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCR9P51686 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.79■□□□□ 0.6
CCR9P51686 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 RARRES2P1-201ENST00000474487 481 ntBASIC18.79■□□□□ 0.6
CCR9P51686 UNC93B8-201ENST00000511903 705 ntBASIC18.79■□□□□ 0.6
CCR9P51686 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCR9P51686 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
CCR9P51686 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCR9P51686 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCR9P51686 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.78■□□□□ 0.6
CCR9P51686 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.78■□□□□ 0.6
CCR9P51686 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCR9P51686 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCR9P51686 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCR9P51686 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.78■□□□□ 0.6
CCR9P51686 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCR9P51686 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCR9P51686 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCR9P51686 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 AC006455.2-201ENST00000429931 906 ntBASIC18.77■□□□□ 0.6
CCR9P51686 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.77■□□□□ 0.6
CCR9P51686 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.77■□□□□ 0.6
CCR9P51686 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCR9P51686 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CCR9P51686 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCR9P51686 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCR9P51686 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCR9P51686 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CCR9P51686 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
CCR9P51686 AC026471.6-201ENST00000622954 1905 ntBASIC18.76■□□□□ 0.59
CCR9P51686 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.76■□□□□ 0.59
CCR9P51686 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCR9P51686 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.76■□□□□ 0.59
CCR9P51686 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.76■□□□□ 0.59
CCR9P51686 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.76■□□□□ 0.59
CCR9P51686 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.76■□□□□ 0.59
CCR9P51686 AC087239.1-201ENST00000622671 572 ntBASIC18.76■□□□□ 0.59
CCR9P51686 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.76■□□□□ 0.59
CCR9P51686 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCR9P51686 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCR9P51686 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCR9P51686 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCR9P51686 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCR9P51686 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCR9P51686 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 OR2I1P-207ENST00000453522 948 ntBASIC18.75■□□□□ 0.59
CCR9P51686 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCR9P51686 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.75■□□□□ 0.59
CCR9P51686 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms