Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF144AP50876 OXCT2P1-201ENST00000447263 1535 ntBASIC19.85■□□□□ 0.77
RNF144AP50876 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNF144AP50876 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF144AP50876 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 TSPY26P-201ENST00000476365 1326 ntBASIC19.84■□□□□ 0.77
RNF144AP50876 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF144AP50876 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF144AP50876 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF144AP50876 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF144AP50876 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF144AP50876 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF144AP50876 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RNF144AP50876 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF144AP50876 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
RNF144AP50876 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF144AP50876 AP005435.1-201ENST00000529293 1178 ntBASIC19.83■□□□□ 0.77
RNF144AP50876 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF144AP50876 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF144AP50876 AC068587.7-201ENST00000641602 218 ntBASIC19.83■□□□□ 0.77
RNF144AP50876 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF144AP50876 AL137060.1-201ENST00000618151 2648 ntBASIC19.83■□□□□ 0.76
RNF144AP50876 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RNF144AP50876 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF144AP50876 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RNF144AP50876 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RNF144AP50876 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF144AP50876 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF144AP50876 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF144AP50876 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
RNF144AP50876 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF144AP50876 AL355001.2-201ENST00000620617 1191 ntBASIC19.82■□□□□ 0.76
RNF144AP50876 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF144AP50876 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF144AP50876 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF144AP50876 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF144AP50876 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RNF144AP50876 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 EDA-201ENST00000338901 1233 ntBASIC19.81■□□□□ 0.76
RNF144AP50876 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 MIR939-201ENST00000401314 82 ntBASIC19.81■□□□□ 0.76
RNF144AP50876 AC027682.1-201ENST00000562846 899 ntBASIC19.81■□□□□ 0.76
RNF144AP50876 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF144AP50876 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF144AP50876 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF144AP50876 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF144AP50876 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF144AP50876 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF144AP50876 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF144AP50876 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF144AP50876 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF144AP50876 AL136967.2-201ENST00000623968 743 ntBASIC19.8■□□□□ 0.76
RNF144AP50876 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF144AP50876 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF144AP50876 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF144AP50876 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF144AP50876 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF144AP50876 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms