Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLCSP50747 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.39■□□□□ 0.85
HLCSP50747 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.39■□□□□ 0.85
HLCSP50747 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLCSP50747 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HLCSP50747 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLCSP50747 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HLCSP50747 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.39■□□□□ 0.85
HLCSP50747 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HLCSP50747 AC026271.2-201ENST00000428091 497 ntBASIC20.38■□□□□ 0.85
HLCSP50747 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.38■□□□□ 0.85
HLCSP50747 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.38■□□□□ 0.85
HLCSP50747 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.38■□□□□ 0.85
HLCSP50747 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLCSP50747 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
HLCSP50747 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 FAM99A-202ENST00000538190 1989 ntBASIC20.37■□□□□ 0.85
HLCSP50747 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.37■□□□□ 0.85
HLCSP50747 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.37■□□□□ 0.85
HLCSP50747 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
HLCSP50747 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLCSP50747 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLCSP50747 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HLCSP50747 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.37■□□□□ 0.85
HLCSP50747 AC010525.1-201ENST00000585559 441 ntBASIC20.37■□□□□ 0.85
HLCSP50747 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLCSP50747 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HLCSP50747 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
HLCSP50747 TSPY26P-201ENST00000476365 1326 ntBASIC20.36■□□□□ 0.85
HLCSP50747 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HLCSP50747 IGHV3-19-201ENST00000521488 291 ntBASIC20.36■□□□□ 0.85
HLCSP50747 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.36■□□□□ 0.85
HLCSP50747 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HLCSP50747 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HLCSP50747 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLCSP50747 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.35■□□□□ 0.85
HLCSP50747 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HLCSP50747 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.35■□□□□ 0.85
HLCSP50747 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HLCSP50747 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
HLCSP50747 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.35■□□□□ 0.85
HLCSP50747 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.35■□□□□ 0.85
HLCSP50747 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.35■□□□□ 0.85
HLCSP50747 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HLCSP50747 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.35■□□□□ 0.85
HLCSP50747 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HLCSP50747 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HLCSP50747 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HLCSP50747 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLCSP50747 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLCSP50747 AC005229.4-201ENST00000610085 2198 ntBASIC20.34■□□□□ 0.85
HLCSP50747 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLCSP50747 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLCSP50747 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.34■□□□□ 0.85
HLCSP50747 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLCSP50747 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HLCSP50747 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLCSP50747 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLCSP50747 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.33■□□□□ 0.85
HLCSP50747 AL353803.4-201ENST00000565882 1934 ntBASIC20.33■□□□□ 0.85
HLCSP50747 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HLCSP50747 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.33■□□□□ 0.85
HLCSP50747 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.33■□□□□ 0.85
HLCSP50747 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLCSP50747 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLCSP50747 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLCSP50747 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
HLCSP50747 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLCSP50747 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.33■□□□□ 0.85
HLCSP50747 AP005435.1-201ENST00000529293 1178 ntBASIC20.33■□□□□ 0.85
HLCSP50747 MIR6821-201ENST00000617625 74 ntBASIC20.33■□□□□ 0.85
HLCSP50747 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms