Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC6A12P48065 MIR572-201ENST00000384983 95 ntBASIC20.73■□□□□ 0.91
SLC6A12P48065 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A12P48065 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.73■□□□□ 0.91
SLC6A12P48065 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
SLC6A12P48065 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC6A12P48065 AC105233.4-201ENST00000642045 216 ntBASIC20.73■□□□□ 0.91
SLC6A12P48065 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A12P48065 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC6A12P48065 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC6A12P48065 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A12P48065 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC6A12P48065 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A12P48065 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC6A12P48065 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.72■□□□□ 0.91
SLC6A12P48065 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A12P48065 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A12P48065 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC6A12P48065 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A12P48065 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A12P48065 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A12P48065 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A12P48065 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC6A12P48065 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.71■□□□□ 0.91
SLC6A12P48065 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC6A12P48065 AC104564.3-201ENST00000582367 638 ntBASIC20.71■□□□□ 0.91
SLC6A12P48065 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 AC003102.1-202ENST00000563394 1796 ntBASIC20.71■□□□□ 0.91
SLC6A12P48065 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A12P48065 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
SLC6A12P48065 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A12P48065 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 AC026310.3-201ENST00000625186 2373 ntBASIC20.7■□□□□ 0.9
SLC6A12P48065 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC6A12P48065 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC6A12P48065 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A12P48065 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A12P48065 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A12P48065 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A12P48065 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A12P48065 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 AC142381.2-201ENST00000566120 298 ntBASIC20.69■□□□□ 0.9
SLC6A12P48065 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
SLC6A12P48065 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC6A12P48065 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A12P48065 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A12P48065 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SLC6A12P48065 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC6A12P48065 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A12P48065 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A12P48065 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC6A12P48065 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A12P48065 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC6A12P48065 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A12P48065 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A12P48065 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A12P48065 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A12P48065 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A12P48065 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A12P48065 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A12P48065 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A12P48065 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC6A12P48065 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC6A12P48065 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.67■□□□□ 0.9
SLC6A12P48065 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A12P48065 Z98882.1-201ENST00000622160 2253 ntBASIC20.67■□□□□ 0.9
SLC6A12P48065 AC009237.3-201ENST00000393279 1427 ntBASIC20.67■□□□□ 0.9
SLC6A12P48065 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A12P48065 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A12P48065 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.67■□□□□ 0.9
SLC6A12P48065 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A12P48065 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC6A12P48065 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 MIR638-201ENST00000385237 100 ntBASIC20.66■□□□□ 0.9
SLC6A12P48065 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A12P48065 AC012414.1-201ENST00000556676 535 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms