Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.52■□□□□ 0.4
SNCAP37840 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.52■□□□□ 0.39
SNCAP37840 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNCAP37840 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNCAP37840 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SNCAP37840 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNCAP37840 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SNCAP37840 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNCAP37840 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.51■□□□□ 0.39
SNCAP37840 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.51■□□□□ 0.39
SNCAP37840 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SNCAP37840 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.51■□□□□ 0.39
SNCAP37840 AC087742.1-201ENST00000575880 1738 ntBASIC17.51■□□□□ 0.39
SNCAP37840 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.51■□□□□ 0.39
SNCAP37840 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNCAP37840 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNCAP37840 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.51■□□□□ 0.39
SNCAP37840 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SNCAP37840 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.5■□□□□ 0.39
SNCAP37840 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.5■□□□□ 0.39
SNCAP37840 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNCAP37840 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.5■□□□□ 0.39
SNCAP37840 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNCAP37840 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SNCAP37840 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNCAP37840 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SNCAP37840 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SNCAP37840 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
SNCAP37840 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SNCAP37840 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.49■□□□□ 0.39
SNCAP37840 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.49■□□□□ 0.39
SNCAP37840 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.49■□□□□ 0.39
SNCAP37840 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.49■□□□□ 0.39
SNCAP37840 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.49■□□□□ 0.39
SNCAP37840 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SNCAP37840 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNCAP37840 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
SNCAP37840 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 LINC01960-201ENST00000563759 1884 ntBASIC17.48■□□□□ 0.39
SNCAP37840 AC244015.2-201ENST00000616358 1861 ntBASIC17.48■□□□□ 0.39
SNCAP37840 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNCAP37840 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNCAP37840 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 DUX4L4-201ENST00000566884 1269 ntBASIC17.48■□□□□ 0.39
SNCAP37840 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SNCAP37840 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SNCAP37840 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SNCAP37840 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNCAP37840 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNCAP37840 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.47■□□□□ 0.39
SNCAP37840 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.47■□□□□ 0.39
SNCAP37840 MTDHP2-201ENST00000601468 714 ntBASIC17.47■□□□□ 0.39
SNCAP37840 AC092028.1-203ENST00000608262 953 ntBASIC17.47■□□□□ 0.39
SNCAP37840 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.47■□□□□ 0.39
SNCAP37840 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNCAP37840 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNCAP37840 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SNCAP37840 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms