Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.91■□□□□ 0.62
MSR1P21757 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.91■□□□□ 0.62
MSR1P21757 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.91■□□□□ 0.62
MSR1P21757 AL139246.5-201ENST00000606645 996 ntBASIC18.91■□□□□ 0.62
MSR1P21757 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.91■□□□□ 0.62
MSR1P21757 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.91■□□□□ 0.62
MSR1P21757 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSR1P21757 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.91■□□□□ 0.62
MSR1P21757 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSR1P21757 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.91■□□□□ 0.62
MSR1P21757 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSR1P21757 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSR1P21757 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.9■□□□□ 0.62
MSR1P21757 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 AP004607.7-201ENST00000527152 1677 ntBASIC18.9■□□□□ 0.62
MSR1P21757 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.9■□□□□ 0.62
MSR1P21757 AF213884.3-201ENST00000563833 479 ntBASIC18.9■□□□□ 0.62
MSR1P21757 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MSR1P21757 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.9■□□□□ 0.62
MSR1P21757 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSR1P21757 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.9■□□□□ 0.62
MSR1P21757 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.89■□□□□ 0.62
MSR1P21757 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.89■□□□□ 0.61
MSR1P21757 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
MSR1P21757 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.89■□□□□ 0.61
MSR1P21757 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MSR1P21757 MIR939-201ENST00000401314 82 ntBASIC18.89■□□□□ 0.61
MSR1P21757 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 AC091305.1-201ENST00000479476 895 ntBASIC18.89■□□□□ 0.61
MSR1P21757 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MSR1P21757 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
MSR1P21757 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.89■□□□□ 0.61
MSR1P21757 RASA4CP-201ENST00000424092 1398 ntBASIC18.89■□□□□ 0.61
MSR1P21757 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSR1P21757 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.88■□□□□ 0.61
MSR1P21757 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.88■□□□□ 0.61
MSR1P21757 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MSR1P21757 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.88■□□□□ 0.61
MSR1P21757 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MSR1P21757 SMUG1P1-201ENST00000590640 811 ntBASIC18.88■□□□□ 0.61
MSR1P21757 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.88■□□□□ 0.61
MSR1P21757 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 TSPY26P-201ENST00000476365 1326 ntBASIC18.88■□□□□ 0.61
MSR1P21757 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.88■□□□□ 0.61
MSR1P21757 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.88■□□□□ 0.61
MSR1P21757 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MSR1P21757 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MSR1P21757 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSR1P21757 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSR1P21757 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSR1P21757 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSR1P21757 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSR1P21757 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.87■□□□□ 0.61
MSR1P21757 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
MSR1P21757 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
MSR1P21757 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.87■□□□□ 0.61
MSR1P21757 AL031432.3-201ENST00000607698 485 ntBASIC18.87■□□□□ 0.61
MSR1P21757 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSR1P21757 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.86■□□□□ 0.61
MSR1P21757 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
MSR1P21757 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.86■□□□□ 0.61
MSR1P21757 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MSR1P21757 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms