Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 IGHV3-19-201ENST00000521488 291 ntBASIC19.73■□□□□ 0.75
PRKCAP17252 AC142381.2-201ENST00000566120 298 ntBASIC19.73■□□□□ 0.75
PRKCAP17252 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKCAP17252 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PRKCAP17252 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
PRKCAP17252 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PRKCAP17252 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 OXCT2P1-201ENST00000447263 1535 ntBASIC19.72■□□□□ 0.75
PRKCAP17252 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 AC139530.1-201ENST00000575312 1977 ntBASIC19.72■□□□□ 0.75
PRKCAP17252 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.72■□□□□ 0.75
PRKCAP17252 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.72■□□□□ 0.75
PRKCAP17252 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 AC079089.2-201ENST00000531211 1277 ntBASIC19.72■□□□□ 0.75
PRKCAP17252 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.72■□□□□ 0.75
PRKCAP17252 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.72■□□□□ 0.75
PRKCAP17252 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PRKCAP17252 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
PRKCAP17252 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PRKCAP17252 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKCAP17252 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.71■□□□□ 0.75
PRKCAP17252 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKCAP17252 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PRKCAP17252 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.71■□□□□ 0.75
PRKCAP17252 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRKCAP17252 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
PRKCAP17252 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRKCAP17252 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.7■□□□□ 0.74
PRKCAP17252 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PRKCAP17252 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.7■□□□□ 0.74
PRKCAP17252 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.7■□□□□ 0.74
PRKCAP17252 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PRKCAP17252 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PRKCAP17252 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRKCAP17252 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
PRKCAP17252 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PRKCAP17252 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.69■□□□□ 0.74
PRKCAP17252 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.69■□□□□ 0.74
PRKCAP17252 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.69■□□□□ 0.74
PRKCAP17252 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PRKCAP17252 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.69■□□□□ 0.74
PRKCAP17252 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.69■□□□□ 0.74
PRKCAP17252 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PRKCAP17252 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 TSPY26P-201ENST00000476365 1326 ntBASIC19.69■□□□□ 0.74
PRKCAP17252 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.69■□□□□ 0.74
PRKCAP17252 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRKCAP17252 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PRKCAP17252 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRKCAP17252 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.68■□□□□ 0.74
PRKCAP17252 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.68■□□□□ 0.74
PRKCAP17252 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PRKCAP17252 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRKCAP17252 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRKCAP17252 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.67■□□□□ 0.74
PRKCAP17252 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms