Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.91■■□□□ 1.1
BRAFP15056 AL031432.3-201ENST00000607698 485 ntBASIC21.91■■□□□ 1.1
BRAFP15056 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRAFP15056 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.91■■□□□ 1.1
BRAFP15056 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
BRAFP15056 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRAFP15056 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.9■■□□□ 1.1
BRAFP15056 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
BRAFP15056 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.9■■□□□ 1.1
BRAFP15056 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.9■■□□□ 1.1
BRAFP15056 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.9■■□□□ 1.1
BRAFP15056 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.9■■□□□ 1.1
BRAFP15056 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
BRAFP15056 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
BRAFP15056 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
BRAFP15056 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRAFP15056 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BRAFP15056 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.89■■□□□ 1.1
BRAFP15056 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BRAFP15056 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
BRAFP15056 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BRAFP15056 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BRAFP15056 MIR3181-201ENST00000578512 73 ntBASIC21.89■■□□□ 1.09
BRAFP15056 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.89■■□□□ 1.09
BRAFP15056 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.89■■□□□ 1.09
BRAFP15056 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BRAFP15056 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BRAFP15056 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.88■■□□□ 1.09
BRAFP15056 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.88■■□□□ 1.09
BRAFP15056 AL138724.1-201ENST00000606771 1088 ntBASIC21.88■■□□□ 1.09
BRAFP15056 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.88■■□□□ 1.09
BRAFP15056 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BRAFP15056 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.87■■□□□ 1.09
BRAFP15056 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.87■■□□□ 1.09
BRAFP15056 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRAFP15056 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BRAFP15056 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRAFP15056 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRAFP15056 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BRAFP15056 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.86■■□□□ 1.09
BRAFP15056 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.86■■□□□ 1.09
BRAFP15056 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.86■■□□□ 1.09
BRAFP15056 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 MIR4767-201ENST00000582827 78 ntBASIC21.86■■□□□ 1.09
BRAFP15056 AC011298.3-201ENST00000615796 283 ntBASIC21.86■■□□□ 1.09
BRAFP15056 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.86■■□□□ 1.09
BRAFP15056 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.86■■□□□ 1.09
BRAFP15056 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
BRAFP15056 FP325331.1-202ENST00000623531 1380 ntBASIC21.86■■□□□ 1.09
BRAFP15056 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BRAFP15056 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
BRAFP15056 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRAFP15056 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.85■■□□□ 1.09
BRAFP15056 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
BRAFP15056 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRAFP15056 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
BRAFP15056 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
BRAFP15056 Z98882.1-201ENST00000622160 2253 ntBASIC21.85■■□□□ 1.09
BRAFP15056 EDA-201ENST00000338901 1233 ntBASIC21.85■■□□□ 1.09
BRAFP15056 SUDS3P1-201ENST00000505831 966 ntBASIC21.85■■□□□ 1.09
BRAFP15056 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.85■■□□□ 1.09
BRAFP15056 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
BRAFP15056 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.85■■□□□ 1.09
BRAFP15056 pRNA.6-201ENST00000610482 90 ntBASIC21.85■■□□□ 1.09
BRAFP15056 pRNA.5-201ENST00000612139 90 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms