Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18■□□□□ 0.47
CD74P04233 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CD74P04233 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CD74P04233 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.99■□□□□ 0.47
CD74P04233 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CD74P04233 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.99■□□□□ 0.47
CD74P04233 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CD74P04233 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CD74P04233 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD74P04233 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.98■□□□□ 0.47
CD74P04233 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.98■□□□□ 0.47
CD74P04233 GABARAPL3-202ENST00000624044 1851 ntBASIC17.98■□□□□ 0.47
CD74P04233 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
CD74P04233 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD74P04233 AC007952.6-201ENST00000573168 2673 ntBASIC17.97■□□□□ 0.47
CD74P04233 AC003957.1-201ENST00000625108 2673 ntBASIC17.97■□□□□ 0.47
CD74P04233 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.97■□□□□ 0.47
CD74P04233 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CD74P04233 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
CD74P04233 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 AC137630.3-201ENST00000607245 391 ntBASIC17.97■□□□□ 0.47
CD74P04233 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.97■□□□□ 0.47
CD74P04233 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.97■□□□□ 0.47
CD74P04233 AC009102.2-201ENST00000606772 1639 ntBASIC17.97■□□□□ 0.47
CD74P04233 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD74P04233 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.97■□□□□ 0.47
CD74P04233 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD74P04233 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD74P04233 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.96■□□□□ 0.47
CD74P04233 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CD74P04233 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CD74P04233 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.96■□□□□ 0.47
CD74P04233 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.96■□□□□ 0.47
CD74P04233 AL499627.2-201ENST00000606283 725 ntBASIC17.96■□□□□ 0.47
CD74P04233 AL031602.1-201ENST00000633169 911 ntBASIC17.96■□□□□ 0.47
CD74P04233 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
CD74P04233 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CD74P04233 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD74P04233 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.46
CD74P04233 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CD74P04233 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.95■□□□□ 0.46
CD74P04233 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.95■□□□□ 0.46
CD74P04233 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.95■□□□□ 0.46
CD74P04233 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.95■□□□□ 0.46
CD74P04233 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CD74P04233 MIR4508-201ENST00000584178 70 ntBASIC17.95■□□□□ 0.46
CD74P04233 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CD74P04233 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD74P04233 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CD74P04233 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CD74P04233 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.94■□□□□ 0.46
CD74P04233 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.94■□□□□ 0.46
CD74P04233 OR7E47P-201ENST00000546390 1422 ntBASIC17.94■□□□□ 0.46
CD74P04233 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.94■□□□□ 0.46
CD74P04233 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.94■□□□□ 0.46
CD74P04233 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD74P04233 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms