Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
APOC1P02654 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
APOC1P02654 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
APOC1P02654 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
APOC1P02654 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
APOC1P02654 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.83■□□□□ 0.61
APOC1P02654 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOC1P02654 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC1P02654 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC1P02654 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.83■□□□□ 0.61
APOC1P02654 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC1P02654 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
APOC1P02654 AC131281.2-201ENST00000520478 145 ntBASIC18.83■□□□□ 0.6
APOC1P02654 AP005435.1-201ENST00000529293 1178 ntBASIC18.83■□□□□ 0.6
APOC1P02654 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.83■□□□□ 0.6
APOC1P02654 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC1P02654 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC1P02654 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.82■□□□□ 0.6
APOC1P02654 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APOC1P02654 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC1P02654 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC1P02654 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC1P02654 AL034346.1-201ENST00000568244 1277 ntBASIC18.82■□□□□ 0.6
APOC1P02654 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APOC1P02654 OXCT2P1-201ENST00000447263 1535 ntBASIC18.82■□□□□ 0.6
APOC1P02654 FBXW4P1-201ENST00000426721 2239 ntBASIC18.82■□□□□ 0.6
APOC1P02654 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APOC1P02654 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC1P02654 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APOC1P02654 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
APOC1P02654 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
APOC1P02654 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
APOC1P02654 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APOC1P02654 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.81■□□□□ 0.6
APOC1P02654 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APOC1P02654 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APOC1P02654 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.81■□□□□ 0.6
APOC1P02654 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC1P02654 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.8■□□□□ 0.6
APOC1P02654 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.8■□□□□ 0.6
APOC1P02654 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APOC1P02654 FAM99A-202ENST00000538190 1989 ntBASIC18.8■□□□□ 0.6
APOC1P02654 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
APOC1P02654 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.8■□□□□ 0.6
APOC1P02654 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC1P02654 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
APOC1P02654 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.79■□□□□ 0.6
APOC1P02654 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.79■□□□□ 0.6
APOC1P02654 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
APOC1P02654 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC1P02654 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms