Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.08■■□□□ 1.29
HLA-DRAP01903 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HLA-DRAP01903 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.08■■□□□ 1.29
HLA-DRAP01903 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HLA-DRAP01903 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.08■■□□□ 1.29
HLA-DRAP01903 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.08■■□□□ 1.29
HLA-DRAP01903 TPRG1LP1-201ENST00000598702 760 ntBASIC23.08■■□□□ 1.29
HLA-DRAP01903 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HLA-DRAP01903 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HLA-DRAP01903 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HLA-DRAP01903 AP006587.3-201ENST00000525742 1516 ntBASIC23.08■■□□□ 1.28
HLA-DRAP01903 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.07■■□□□ 1.28
HLA-DRAP01903 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
HLA-DRAP01903 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 AC027612.3-201ENST00000413684 1047 ntBASIC23.07■■□□□ 1.28
HLA-DRAP01903 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.07■■□□□ 1.28
HLA-DRAP01903 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DRAP01903 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.06■■□□□ 1.28
HLA-DRAP01903 AC005224.4-201ENST00000583262 1652 ntBASIC23.06■■□□□ 1.28
HLA-DRAP01903 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.06■■□□□ 1.28
HLA-DRAP01903 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.06■■□□□ 1.28
HLA-DRAP01903 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DRAP01903 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DRAP01903 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DRAP01903 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DRAP01903 AC010542.4-201ENST00000563151 1910 ntBASIC23.06■■□□□ 1.28
HLA-DRAP01903 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.06■■□□□ 1.28
HLA-DRAP01903 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
HLA-DRAP01903 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
HLA-DRAP01903 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DRAP01903 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DRAP01903 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
HLA-DRAP01903 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DRAP01903 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
HLA-DRAP01903 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DRAP01903 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DRAP01903 AC055733.4-201ENST00000638462 1354 ntBASIC23.04■■□□□ 1.28
HLA-DRAP01903 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DRAP01903 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DRAP01903 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DRAP01903 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DRAP01903 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DRAP01903 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.03■■□□□ 1.28
HLA-DRAP01903 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.03■■□□□ 1.28
HLA-DRAP01903 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.03■■□□□ 1.28
HLA-DRAP01903 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DRAP01903 FBXW4P1-201ENST00000426721 2239 ntBASIC23.02■■□□□ 1.28
HLA-DRAP01903 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HLA-DRAP01903 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DRAP01903 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DRAP01903 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.02■■□□□ 1.28
HLA-DRAP01903 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.02■■□□□ 1.28
HLA-DRAP01903 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DRAP01903 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.01■■□□□ 1.27
HLA-DRAP01903 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DRAP01903 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DRAP01903 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23■■□□□ 1.27
HLA-DRAP01903 GOLGA2P6-201ENST00000340929 2049 ntBASIC23■■□□□ 1.27
HLA-DRAP01903 AC003102.1-202ENST00000563394 1796 ntBASIC23■■□□□ 1.27
HLA-DRAP01903 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HLA-DRAP01903 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23■■□□□ 1.27
HLA-DRAP01903 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23■■□□□ 1.27
HLA-DRAP01903 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms