Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-CO1P00395 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 ESRRAP2-201ENST00000418437 1549 ntBASIC21.91■■□□□ 1.1
MT-CO1P00395 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
MT-CO1P00395 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.91■■□□□ 1.1
MT-CO1P00395 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.91■■□□□ 1.1
MT-CO1P00395 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.91■■□□□ 1.1
MT-CO1P00395 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.91■■□□□ 1.1
MT-CO1P00395 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MT-CO1P00395 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-CO1P00395 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
MT-CO1P00395 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
MT-CO1P00395 AC009237.3-201ENST00000393279 1427 ntBASIC21.9■■□□□ 1.1
MT-CO1P00395 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.9■■□□□ 1.1
MT-CO1P00395 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
MT-CO1P00395 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MT-CO1P00395 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-CO1P00395 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.9■■□□□ 1.1
MT-CO1P00395 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MT-CO1P00395 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.89■■□□□ 1.1
MT-CO1P00395 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MT-CO1P00395 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.89■■□□□ 1.1
MT-CO1P00395 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MT-CO1P00395 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.89■■□□□ 1.09
MT-CO1P00395 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
MT-CO1P00395 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.89■■□□□ 1.09
MT-CO1P00395 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
MT-CO1P00395 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MT-CO1P00395 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.89■■□□□ 1.09
MT-CO1P00395 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.89■■□□□ 1.09
MT-CO1P00395 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.89■■□□□ 1.09
MT-CO1P00395 AC022517.1-201ENST00000592429 346 ntBASIC21.89■■□□□ 1.09
MT-CO1P00395 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-CO1P00395 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MT-CO1P00395 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-CO1P00395 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MT-CO1P00395 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MT-CO1P00395 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.88■■□□□ 1.09
MT-CO1P00395 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.88■■□□□ 1.09
MT-CO1P00395 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.88■■□□□ 1.09
MT-CO1P00395 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.88■■□□□ 1.09
MT-CO1P00395 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.88■■□□□ 1.09
MT-CO1P00395 AC127496.7-201ENST00000625110 1798 ntBASIC21.88■■□□□ 1.09
MT-CO1P00395 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
MT-CO1P00395 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.88■■□□□ 1.09
MT-CO1P00395 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-CO1P00395 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.87■■□□□ 1.09
MT-CO1P00395 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
MT-CO1P00395 IKBKGP1-201ENST00000612193 1073 ntBASIC21.87■■□□□ 1.09
MT-CO1P00395 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-CO1P00395 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-CO1P00395 AP004607.4-201ENST00000530158 1459 ntBASIC21.87■■□□□ 1.09
MT-CO1P00395 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MT-CO1P00395 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
MT-CO1P00395 AC055733.4-201ENST00000638462 1354 ntBASIC21.87■■□□□ 1.09
MT-CO1P00395 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-CO1P00395 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.86■■□□□ 1.09
MT-CO1P00395 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.86■■□□□ 1.09
MT-CO1P00395 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.86■■□□□ 1.09
MT-CO1P00395 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-CO1P00395 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.86■■□□□ 1.09
MT-CO1P00395 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
MT-CO1P00395 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
MT-CO1P00395 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.86■■□□□ 1.09
MT-CO1P00395 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.86■■□□□ 1.09
MT-CO1P00395 AC004854.2-201ENST00000608450 1441 ntBASIC21.86■■□□□ 1.09
MT-CO1P00395 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MT-CO1P00395 CLDN5-201ENST00000403084 2357 ntBASIC21.85■■□□□ 1.09
MT-CO1P00395 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-CO1P00395 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-CO1P00395 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-CO1P00395 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.85■■□□□ 1.09
MT-CO1P00395 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.85■■□□□ 1.09
MT-CO1P00395 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.85■■□□□ 1.09
MT-CO1P00395 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms