Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.96■□□□□ 0.63
CNOT4O95628 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT4O95628 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CNOT4O95628 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT4O95628 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.96■□□□□ 0.63
CNOT4O95628 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT4O95628 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CNOT4O95628 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.95■□□□□ 0.62
CNOT4O95628 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.95■□□□□ 0.62
CNOT4O95628 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT4O95628 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT4O95628 AP004607.7-201ENST00000527152 1677 ntBASIC18.95■□□□□ 0.62
CNOT4O95628 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT4O95628 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT4O95628 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT4O95628 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT4O95628 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CNOT4O95628 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CNOT4O95628 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CNOT4O95628 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT4O95628 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.94■□□□□ 0.62
CNOT4O95628 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.94■□□□□ 0.62
CNOT4O95628 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.94■□□□□ 0.62
CNOT4O95628 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.94■□□□□ 0.62
CNOT4O95628 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CNOT4O95628 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT4O95628 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.94■□□□□ 0.62
CNOT4O95628 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT4O95628 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 AC139530.1-201ENST00000575312 1977 ntBASIC18.93■□□□□ 0.62
CNOT4O95628 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 ID1-201ENST00000376105 1233 ntBASIC18.93■□□□□ 0.62
CNOT4O95628 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.93■□□□□ 0.62
CNOT4O95628 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT4O95628 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.93■□□□□ 0.62
CNOT4O95628 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.93■□□□□ 0.62
CNOT4O95628 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT4O95628 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT4O95628 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNOT4O95628 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT4O95628 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT4O95628 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNOT4O95628 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNOT4O95628 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNOT4O95628 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT4O95628 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT4O95628 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT4O95628 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 NTF6G-201ENST00000591094 616 ntBASIC18.91■□□□□ 0.62
CNOT4O95628 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT4O95628 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms