Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
USP1O94782 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
USP1O94782 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.61■■□□□ 1.05
USP1O94782 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.61■■□□□ 1.05
USP1O94782 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.61■■□□□ 1.05
USP1O94782 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP1O94782 PKD1P6-201ENST00000343738 4769 ntBASIC21.61■■□□□ 1.05
USP1O94782 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
USP1O94782 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.61■■□□□ 1.05
USP1O94782 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.61■■□□□ 1.05
USP1O94782 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP1O94782 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP1O94782 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
USP1O94782 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.6■■□□□ 1.05
USP1O94782 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP1O94782 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
USP1O94782 SLC47A1P1-202ENST00000449666 945 ntBASIC21.6■■□□□ 1.05
USP1O94782 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.6■■□□□ 1.05
USP1O94782 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP1O94782 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP1O94782 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.6■■□□□ 1.05
USP1O94782 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.6■■□□□ 1.05
USP1O94782 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP1O94782 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
USP1O94782 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
USP1O94782 AC019069.1-201ENST00000610008 1333 ntBASIC21.59■■□□□ 1.05
USP1O94782 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
USP1O94782 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP1O94782 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
USP1O94782 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
USP1O94782 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
USP1O94782 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP1O94782 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP1O94782 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP1O94782 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.58■■□□□ 1.05
USP1O94782 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.58■■□□□ 1.05
USP1O94782 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.58■■□□□ 1.05
USP1O94782 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP1O94782 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP1O94782 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
USP1O94782 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
USP1O94782 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP1O94782 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.58■■□□□ 1.04
USP1O94782 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP1O94782 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.57■■□□□ 1.04
USP1O94782 Z98882.1-201ENST00000622160 2253 ntBASIC21.57■■□□□ 1.04
USP1O94782 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.57■■□□□ 1.04
USP1O94782 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.57■■□□□ 1.04
USP1O94782 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.57■■□□□ 1.04
USP1O94782 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.57■■□□□ 1.04
USP1O94782 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
USP1O94782 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USP1O94782 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.56■■□□□ 1.04
USP1O94782 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.56■■□□□ 1.04
USP1O94782 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
USP1O94782 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.56■■□□□ 1.04
USP1O94782 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
USP1O94782 AL034346.1-201ENST00000568244 1277 ntBASIC21.56■■□□□ 1.04
USP1O94782 AC104564.3-201ENST00000582367 638 ntBASIC21.56■■□□□ 1.04
USP1O94782 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
USP1O94782 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.56■■□□□ 1.04
USP1O94782 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USP1O94782 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP1O94782 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
USP1O94782 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
USP1O94782 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.55■■□□□ 1.04
USP1O94782 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
USP1O94782 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.55■■□□□ 1.04
USP1O94782 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
USP1O94782 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms