Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BEST1O76090 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
BEST1O76090 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
BEST1O76090 AC022517.1-201ENST00000592429 346 ntBASIC22.59■■□□□ 1.21
BEST1O76090 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BEST1O76090 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BEST1O76090 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BEST1O76090 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.58■■□□□ 1.21
BEST1O76090 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.58■■□□□ 1.21
BEST1O76090 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BEST1O76090 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BEST1O76090 IKBKGP1-201ENST00000612193 1073 ntBASIC22.58■■□□□ 1.21
BEST1O76090 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.58■■□□□ 1.21
BEST1O76090 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BEST1O76090 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.58■■□□□ 1.2
BEST1O76090 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
BEST1O76090 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
BEST1O76090 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.58■■□□□ 1.2
BEST1O76090 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.57■■□□□ 1.2
BEST1O76090 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
BEST1O76090 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BEST1O76090 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BEST1O76090 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
BEST1O76090 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BEST1O76090 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BEST1O76090 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.56■■□□□ 1.2
BEST1O76090 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.56■■□□□ 1.2
BEST1O76090 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.56■■□□□ 1.2
BEST1O76090 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.56■■□□□ 1.2
BEST1O76090 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BEST1O76090 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.56■■□□□ 1.2
BEST1O76090 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.56■■□□□ 1.2
BEST1O76090 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
BEST1O76090 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
BEST1O76090 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BEST1O76090 ECEL1P1-201ENST00000373592 1742 ntBASIC22.55■■□□□ 1.2
BEST1O76090 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.55■■□□□ 1.2
BEST1O76090 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.55■■□□□ 1.2
BEST1O76090 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.55■■□□□ 1.2
BEST1O76090 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.55■■□□□ 1.2
BEST1O76090 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BEST1O76090 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.55■■□□□ 1.2
BEST1O76090 FAM99A-202ENST00000538190 1989 ntBASIC22.54■■□□□ 1.2
BEST1O76090 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.54■■□□□ 1.2
BEST1O76090 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.54■■□□□ 1.2
BEST1O76090 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.54■■□□□ 1.2
BEST1O76090 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.54■■□□□ 1.2
BEST1O76090 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.54■■□□□ 1.2
BEST1O76090 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.54■■□□□ 1.2
BEST1O76090 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 AL117328.2-201ENST00000624617 1940 ntBASIC22.54■■□□□ 1.2
BEST1O76090 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
BEST1O76090 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BEST1O76090 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
BEST1O76090 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.53■■□□□ 1.2
BEST1O76090 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
BEST1O76090 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BEST1O76090 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
BEST1O76090 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.53■■□□□ 1.2
BEST1O76090 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
BEST1O76090 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.53■■□□□ 1.2
BEST1O76090 AC092437.1-201ENST00000624794 1048 ntBASIC22.53■■□□□ 1.2
BEST1O76090 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 EP400NL-214ENST00000641289 2402 ntBASIC22.53■■□□□ 1.2
BEST1O76090 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BEST1O76090 KRT87P-202ENST00000534226 1464 ntBASIC22.53■■□□□ 1.2
BEST1O76090 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.53■■□□□ 1.2
BEST1O76090 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BEST1O76090 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BEST1O76090 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BEST1O76090 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BEST1O76090 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BEST1O76090 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.52■■□□□ 1.2
BEST1O76090 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
BEST1O76090 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.51■■□□□ 1.19
BEST1O76090 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
BEST1O76090 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.51■■□□□ 1.19
BEST1O76090 AC003102.1-202ENST00000563394 1796 ntBASIC22.51■■□□□ 1.19
BEST1O76090 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms