Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.64■■■□□ 2.01
PTCD1O75127 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.64■■■□□ 2.01
PTCD1O75127 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.64■■■□□ 2.01
PTCD1O75127 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.63■■■□□ 2.01
PTCD1O75127 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCD1O75127 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.63■■■□□ 2.01
PTCD1O75127 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
PTCD1O75127 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.63■■■□□ 2.01
PTCD1O75127 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCD1O75127 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.63■■■□□ 2.01
PTCD1O75127 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PTCD1O75127 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCD1O75127 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCD1O75127 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCD1O75127 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCD1O75127 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCD1O75127 TERF1P5-201ENST00000477545 1207 ntBASIC27.62■■■□□ 2.01
PTCD1O75127 EEF1DP3-203ENST00000566025 782 ntBASIC27.62■■■□□ 2.01
PTCD1O75127 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.62■■■□□ 2.01
PTCD1O75127 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCD1O75127 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.61■■■□□ 2.01
PTCD1O75127 AC068338.2-201ENST00000563278 1430 ntBASIC27.61■■■□□ 2.01
PTCD1O75127 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
PTCD1O75127 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PTCD1O75127 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.61■■■□□ 2.01
PTCD1O75127 AC013268.1-206ENST00000638368 961 ntBASIC27.61■■■□□ 2.01
PTCD1O75127 AC112229.1-201ENST00000639295 961 ntBASIC27.61■■■□□ 2.01
PTCD1O75127 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
PTCD1O75127 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.61■■■□□ 2.01
PTCD1O75127 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
PTCD1O75127 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
PTCD1O75127 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCD1O75127 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCD1O75127 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PTCD1O75127 AC073210.2-201ENST00000430369 194 ntBASIC27.6■■■□□ 2.01
PTCD1O75127 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.6■■■□□ 2.01
PTCD1O75127 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
PTCD1O75127 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.6■■■□□ 2.01
PTCD1O75127 AP006587.3-201ENST00000525742 1516 ntBASIC27.6■■■□□ 2.01
PTCD1O75127 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.6■■■□□ 2.01
PTCD1O75127 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD1O75127 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.59■■■□□ 2.01
PTCD1O75127 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD1O75127 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD1O75127 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD1O75127 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.59■■■□□ 2.01
PTCD1O75127 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD1O75127 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.59■■■□□ 2.01
PTCD1O75127 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.59■■■□□ 2.01
PTCD1O75127 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD1O75127 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD1O75127 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.58■■■□□ 2.01
PTCD1O75127 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
PTCD1O75127 CYP2T1P-201ENST00000432607 1285 ntBASIC27.58■■■□□ 2.01
PTCD1O75127 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.58■■■□□ 2.01
PTCD1O75127 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 AC053503.5-201ENST00000601508 636 ntBASIC27.58■■■□□ 2.01
PTCD1O75127 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.58■■■□□ 2.01
PTCD1O75127 AC093323.1-202ENST00000635031 2045 ntBASIC27.58■■■□□ 2.01
PTCD1O75127 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD1O75127 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD1O75127 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
PTCD1O75127 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.58■■■□□ 2
PTCD1O75127 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PTCD1O75127 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
PTCD1O75127 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.57■■■□□ 2
PTCD1O75127 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.57■■■□□ 2
PTCD1O75127 AL034346.1-201ENST00000568244 1277 ntBASIC27.57■■■□□ 2
PTCD1O75127 SLC7A5P1-201ENST00000568957 537 ntBASIC27.57■■■□□ 2
PTCD1O75127 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.57■■■□□ 2
PTCD1O75127 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.57■■■□□ 2
PTCD1O75127 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PTCD1O75127 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.57■■■□□ 2
PTCD1O75127 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.56■■■□□ 2
PTCD1O75127 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
PTCD1O75127 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 FAM201B-201ENST00000458407 597 ntBASIC27.56■■■□□ 2
PTCD1O75127 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
PTCD1O75127 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.56■■■□□ 2
PTCD1O75127 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
PTCD1O75127 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCD1O75127 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCD1O75127 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.55■■■□□ 2
PTCD1O75127 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.55■■■□□ 2
PTCD1O75127 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.55■■■□□ 2
PTCD1O75127 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.55■■■□□ 2
PTCD1O75127 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.55■■■□□ 2
PTCD1O75127 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.55■■■□□ 2
PTCD1O75127 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.55■■■□□ 2
PTCD1O75127 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
PTCD1O75127 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms