Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PRKNO60260 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.95■□□□□ 0.78
PRKNO60260 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.95■□□□□ 0.78
PRKNO60260 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
PRKNO60260 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRKNO60260 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
PRKNO60260 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.94■□□□□ 0.78
PRKNO60260 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.94■□□□□ 0.78
PRKNO60260 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRKNO60260 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.94■□□□□ 0.78
PRKNO60260 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.94■□□□□ 0.78
PRKNO60260 KRT18P61-201ENST00000585825 1298 ntBASIC19.94■□□□□ 0.78
PRKNO60260 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.94■□□□□ 0.78
PRKNO60260 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.94■□□□□ 0.78
PRKNO60260 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.94■□□□□ 0.78
PRKNO60260 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRKNO60260 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.94■□□□□ 0.78
PRKNO60260 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 AC242852.2-201ENST00000615738 1807 ntBASIC19.93■□□□□ 0.78
PRKNO60260 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.93■□□□□ 0.78
PRKNO60260 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.93■□□□□ 0.78
PRKNO60260 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.93■□□□□ 0.78
PRKNO60260 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.93■□□□□ 0.78
PRKNO60260 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.93■□□□□ 0.78
PRKNO60260 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRKNO60260 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.93■□□□□ 0.78
PRKNO60260 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
PRKNO60260 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.93■□□□□ 0.78
PRKNO60260 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.92■□□□□ 0.78
PRKNO60260 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.92■□□□□ 0.78
PRKNO60260 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.92■□□□□ 0.78
PRKNO60260 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.92■□□□□ 0.78
PRKNO60260 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRKNO60260 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.92■□□□□ 0.78
PRKNO60260 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.92■□□□□ 0.78
PRKNO60260 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRKNO60260 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRKNO60260 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRKNO60260 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.91■□□□□ 0.78
PRKNO60260 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.91■□□□□ 0.78
PRKNO60260 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRKNO60260 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PRKNO60260 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.91■□□□□ 0.78
PRKNO60260 NTF6G-201ENST00000591094 616 ntBASIC19.91■□□□□ 0.78
PRKNO60260 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.91■□□□□ 0.78
PRKNO60260 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PRKNO60260 AC009237.3-201ENST00000393279 1427 ntBASIC19.91■□□□□ 0.78
PRKNO60260 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRKNO60260 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
PRKNO60260 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRKNO60260 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.9■□□□□ 0.78
PRKNO60260 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRKNO60260 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.9■□□□□ 0.78
PRKNO60260 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.9■□□□□ 0.78
PRKNO60260 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PRKNO60260 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.9■□□□□ 0.78
PRKNO60260 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.9■□□□□ 0.78
PRKNO60260 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.9■□□□□ 0.78
PRKNO60260 AC104564.3-201ENST00000582367 638 ntBASIC19.9■□□□□ 0.78
PRKNO60260 AC092666.2-201ENST00000613287 246 ntBASIC19.9■□□□□ 0.78
PRKNO60260 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRKNO60260 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PRKNO60260 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms