Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC026271.2-201ENST00000428091 497 ntBASIC19.28■□□□□ 0.68
SSX4O60224 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.28■□□□□ 0.68
SSX4O60224 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.28■□□□□ 0.68
SSX4O60224 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SSX4O60224 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.28■□□□□ 0.68
SSX4O60224 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSX4O60224 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.28■□□□□ 0.68
SSX4O60224 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SSX4O60224 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSX4O60224 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSX4O60224 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSX4O60224 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.27■□□□□ 0.68
SSX4O60224 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.27■□□□□ 0.68
SSX4O60224 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.27■□□□□ 0.68
SSX4O60224 AC091305.1-201ENST00000479476 895 ntBASIC19.27■□□□□ 0.68
SSX4O60224 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSX4O60224 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SSX4O60224 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSX4O60224 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 AL161729.1-201ENST00000604104 1402 ntBASIC19.26■□□□□ 0.67
SSX4O60224 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.26■□□□□ 0.67
SSX4O60224 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 AC009102.2-201ENST00000606772 1639 ntBASIC19.26■□□□□ 0.67
SSX4O60224 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX4O60224 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.26■□□□□ 0.67
SSX4O60224 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
SSX4O60224 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SSX4O60224 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSX4O60224 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX4O60224 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SSX4O60224 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX4O60224 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SSX4O60224 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 MIR5787-201ENST00000611784 55 ntBASIC19.25■□□□□ 0.67
SSX4O60224 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX4O60224 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SSX4O60224 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSX4O60224 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SSX4O60224 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SSX4O60224 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.24■□□□□ 0.67
SSX4O60224 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSX4O60224 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSX4O60224 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX4O60224 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.24■□□□□ 0.67
SSX4O60224 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX4O60224 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX4O60224 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SSX4O60224 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SSX4O60224 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX4O60224 AC008764.7-201ENST00000593779 1081 ntBASIC19.23■□□□□ 0.67
SSX4O60224 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SSX4O60224 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX4O60224 LINC01521-201ENST00000504184 1943 ntBASIC19.23■□□□□ 0.67
SSX4O60224 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX4O60224 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX4O60224 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SSX4O60224 CA15P2-201ENST00000611168 834 ntBASIC19.22■□□□□ 0.67
SSX4O60224 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX4O60224 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SSX4O60224 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX4O60224 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms