Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.74■□□□□ 0.91
PEX1O43933 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.74■□□□□ 0.91
PEX1O43933 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.74■□□□□ 0.91
PEX1O43933 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.73■□□□□ 0.91
PEX1O43933 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.73■□□□□ 0.91
PEX1O43933 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 AC024257.2-201ENST00000549699 147 ntBASIC20.73■□□□□ 0.91
PEX1O43933 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEX1O43933 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PEX1O43933 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.72■□□□□ 0.91
PEX1O43933 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX1O43933 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PEX1O43933 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.72■□□□□ 0.91
PEX1O43933 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PEX1O43933 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
PEX1O43933 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX1O43933 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX1O43933 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX1O43933 SYT6-210ENST00000641643 1587 ntBASIC20.72■□□□□ 0.91
PEX1O43933 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PEX1O43933 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PEX1O43933 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 MIR935-201ENST00000401179 91 ntBASIC20.71■□□□□ 0.91
PEX1O43933 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
PEX1O43933 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
PEX1O43933 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.71■□□□□ 0.91
PEX1O43933 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PEX1O43933 AC099791.2-201ENST00000605725 427 ntBASIC20.71■□□□□ 0.91
PEX1O43933 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX1O43933 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PEX1O43933 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PEX1O43933 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX1O43933 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PEX1O43933 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX1O43933 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PEX1O43933 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PEX1O43933 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX1O43933 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.7■□□□□ 0.9
PEX1O43933 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX1O43933 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PEX1O43933 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PEX1O43933 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.69■□□□□ 0.9
PEX1O43933 AC142381.2-201ENST00000566120 298 ntBASIC20.69■□□□□ 0.9
PEX1O43933 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX1O43933 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PEX1O43933 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX1O43933 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PEX1O43933 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.69■□□□□ 0.9
PEX1O43933 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX1O43933 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.68■□□□□ 0.9
PEX1O43933 C17orf82-201ENST00000623772 1530 ntBASIC20.68■□□□□ 0.9
PEX1O43933 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX1O43933 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PEX1O43933 AL353803.4-201ENST00000565882 1934 ntBASIC20.67■□□□□ 0.9
PEX1O43933 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PEX1O43933 RNF165-205ENST00000588679 2904 ntBASIC20.67■□□□□ 0.9
PEX1O43933 EDA-201ENST00000338901 1233 ntBASIC20.67■□□□□ 0.9
PEX1O43933 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PEX1O43933 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX1O43933 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PEX1O43933 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX1O43933 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PEX1O43933 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEX1O43933 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX1O43933 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms