Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.65■■□□□ 1.7
FOXN1O15353 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
FOXN1O15353 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
FOXN1O15353 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
FOXN1O15353 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.65■■□□□ 1.7
FOXN1O15353 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
FOXN1O15353 ANOS2P-203ENST00000472227 1816 ntBASIC25.65■■□□□ 1.7
FOXN1O15353 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.65■■□□□ 1.7
FOXN1O15353 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
FOXN1O15353 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
FOXN1O15353 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.64■■□□□ 1.7
FOXN1O15353 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.64■■□□□ 1.7
FOXN1O15353 MIPEPP3-201ENST00000412105 444 ntBASIC25.64■■□□□ 1.7
FOXN1O15353 CNN2P6-201ENST00000439038 900 ntBASIC25.64■■□□□ 1.7
FOXN1O15353 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.64■■□□□ 1.7
FOXN1O15353 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
FOXN1O15353 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
FOXN1O15353 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.64■■□□□ 1.69
FOXN1O15353 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
FOXN1O15353 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.63■■□□□ 1.69
FOXN1O15353 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
FOXN1O15353 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.63■■□□□ 1.69
FOXN1O15353 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.63■■□□□ 1.69
FOXN1O15353 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.63■■□□□ 1.69
FOXN1O15353 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.63■■□□□ 1.69
FOXN1O15353 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
FOXN1O15353 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.63■■□□□ 1.69
FOXN1O15353 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.63■■□□□ 1.69
FOXN1O15353 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.63■■□□□ 1.69
FOXN1O15353 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.63■■□□□ 1.69
FOXN1O15353 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
FOXN1O15353 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXN1O15353 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
FOXN1O15353 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
FOXN1O15353 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.62■■□□□ 1.69
FOXN1O15353 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.62■■□□□ 1.69
FOXN1O15353 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.62■■□□□ 1.69
FOXN1O15353 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.62■■□□□ 1.69
FOXN1O15353 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.62■■□□□ 1.69
FOXN1O15353 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.62■■□□□ 1.69
FOXN1O15353 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 REXO1L12P-201ENST00000622156 912 ntBASIC25.62■■□□□ 1.69
FOXN1O15353 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.62■■□□□ 1.69
FOXN1O15353 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXN1O15353 AL161729.1-201ENST00000604104 1402 ntBASIC25.62■■□□□ 1.69
FOXN1O15353 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.61■■□□□ 1.69
FOXN1O15353 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 AC012676.1-201ENST00000574705 1949 ntBASIC25.61■■□□□ 1.69
FOXN1O15353 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.61■■□□□ 1.69
FOXN1O15353 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
FOXN1O15353 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.61■■□□□ 1.69
FOXN1O15353 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.61■■□□□ 1.69
FOXN1O15353 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.61■■□□□ 1.69
FOXN1O15353 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.61■■□□□ 1.69
FOXN1O15353 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXN1O15353 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.61■■□□□ 1.69
FOXN1O15353 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
FOXN1O15353 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
FOXN1O15353 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.6■■□□□ 1.69
FOXN1O15353 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.6■■□□□ 1.69
FOXN1O15353 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 AC104187.1-201ENST00000607510 612 ntBASIC25.6■■□□□ 1.69
FOXN1O15353 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
FOXN1O15353 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.59■■□□□ 1.69
FOXN1O15353 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
FOXN1O15353 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.59■■□□□ 1.69
FOXN1O15353 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 LINC01023-201ENST00000606054 436 ntBASIC25.59■■□□□ 1.69
FOXN1O15353 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FOXN1O15353 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FOXN1O15353 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.59■■□□□ 1.69
FOXN1O15353 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FOXN1O15353 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
FOXN1O15353 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
FOXN1O15353 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms