Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.59■■□□□ 1.53
ATP2A1O14983 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
ATP2A1O14983 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.59■■□□□ 1.53
ATP2A1O14983 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
ATP2A1O14983 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
ATP2A1O14983 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.58■■□□□ 1.53
ATP2A1O14983 CNN2P6-201ENST00000439038 900 ntBASIC24.58■■□□□ 1.53
ATP2A1O14983 AC142086.2-201ENST00000569753 217 ntBASIC24.58■■□□□ 1.53
ATP2A1O14983 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.58■■□□□ 1.53
ATP2A1O14983 AL121832.2-201ENST00000610979 668 ntBASIC24.58■■□□□ 1.53
ATP2A1O14983 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.58■■□□□ 1.53
ATP2A1O14983 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP2A1O14983 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
ATP2A1O14983 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.58■■□□□ 1.52
ATP2A1O14983 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
ATP2A1O14983 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ATP2A1O14983 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP2A1O14983 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.57■■□□□ 1.52
ATP2A1O14983 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ATP2A1O14983 AC005181.1-201ENST00000604782 1256 ntBASIC24.57■■□□□ 1.52
ATP2A1O14983 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.57■■□□□ 1.52
ATP2A1O14983 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
ATP2A1O14983 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP2A1O14983 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ATP2A1O14983 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP2A1O14983 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.57■■□□□ 1.52
ATP2A1O14983 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.56■■□□□ 1.52
ATP2A1O14983 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 AL355802.2-201ENST00000402069 882 ntBASIC24.56■■□□□ 1.52
ATP2A1O14983 AC083906.2-201ENST00000511578 360 ntBASIC24.56■■□□□ 1.52
ATP2A1O14983 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.56■■□□□ 1.52
ATP2A1O14983 SLC7A5P2-201ENST00000553010 536 ntBASIC24.56■■□□□ 1.52
ATP2A1O14983 AC010536.3-201ENST00000620306 533 ntBASIC24.56■■□□□ 1.52
ATP2A1O14983 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.56■■□□□ 1.52
ATP2A1O14983 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
ATP2A1O14983 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP2A1O14983 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP2A1O14983 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.55■■□□□ 1.52
ATP2A1O14983 GUSBP6-202ENST00000438529 1198 ntBASIC24.55■■□□□ 1.52
ATP2A1O14983 TSPY6P-201ENST00000448518 926 ntBASIC24.55■■□□□ 1.52
ATP2A1O14983 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.55■■□□□ 1.52
ATP2A1O14983 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
ATP2A1O14983 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP2A1O14983 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP2A1O14983 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP2A1O14983 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP2A1O14983 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ATP2A1O14983 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP2A1O14983 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.54■■□□□ 1.52
ATP2A1O14983 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP2A1O14983 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
ATP2A1O14983 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP2A1O14983 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP2A1O14983 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP2A1O14983 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP2A1O14983 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
ATP2A1O14983 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.53■■□□□ 1.52
ATP2A1O14983 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.53■■□□□ 1.52
ATP2A1O14983 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.53■■□□□ 1.52
ATP2A1O14983 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP2A1O14983 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP2A1O14983 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP2A1O14983 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
ATP2A1O14983 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP2A1O14983 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP2A1O14983 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.52■■□□□ 1.52
ATP2A1O14983 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ATP2A1O14983 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.52■■□□□ 1.52
ATP2A1O14983 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP2A1O14983 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP2A1O14983 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP2A1O14983 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP2A1O14983 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP2A1O14983 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms