Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHD2O14647 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.26■■■□□ 2.43
CHD2O14647 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD2O14647 AL034346.1-201ENST00000568244 1277 ntBASIC30.26■■■□□ 2.43
CHD2O14647 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHD2O14647 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHD2O14647 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD2O14647 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHD2O14647 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD2O14647 AC079089.2-201ENST00000531211 1277 ntBASIC30.25■■■□□ 2.43
CHD2O14647 AL162412.1-201ENST00000567129 965 ntBASIC30.25■■■□□ 2.43
CHD2O14647 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.25■■■□□ 2.43
CHD2O14647 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.25■■■□□ 2.43
CHD2O14647 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHD2O14647 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.25■■■□□ 2.43
CHD2O14647 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD2O14647 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.24■■■□□ 2.43
CHD2O14647 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.24■■■□□ 2.43
CHD2O14647 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CHD2O14647 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
CHD2O14647 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD2O14647 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.23■■■□□ 2.43
CHD2O14647 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD2O14647 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD2O14647 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD2O14647 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC30.23■■■□□ 2.43
CHD2O14647 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.23■■■□□ 2.43
CHD2O14647 AC053503.5-201ENST00000601508 636 ntBASIC30.23■■■□□ 2.43
CHD2O14647 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
CHD2O14647 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CHD2O14647 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD2O14647 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CHD2O14647 AC008694.1-202ENST00000636953 945 ntBASIC30.22■■■□□ 2.43
CHD2O14647 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CHD2O14647 AC008403.3-201ENST00000598924 454 ntBASIC30.22■■■□□ 2.43
CHD2O14647 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC30.22■■■□□ 2.43
CHD2O14647 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.22■■■□□ 2.43
CHD2O14647 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.21■■■□□ 2.43
CHD2O14647 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD2O14647 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD2O14647 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.21■■■□□ 2.43
CHD2O14647 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD2O14647 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.21■■■□□ 2.43
CHD2O14647 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD2O14647 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD2O14647 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CHD2O14647 AC008550.1-201ENST00000511500 884 ntBASIC30.21■■■□□ 2.43
CHD2O14647 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CHD2O14647 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC30.21■■■□□ 2.43
CHD2O14647 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
CHD2O14647 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHD2O14647 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.2■■■□□ 2.43
CHD2O14647 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.2■■■□□ 2.43
CHD2O14647 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.2■■■□□ 2.43
CHD2O14647 LINC01960-201ENST00000563759 1884 ntBASIC30.2■■■□□ 2.43
CHD2O14647 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CHD2O14647 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.19■■■□□ 2.42
CHD2O14647 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD2O14647 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD2O14647 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD2O14647 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.19■■■□□ 2.42
CHD2O14647 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CHD2O14647 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.19■■■□□ 2.42
CHD2O14647 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD2O14647 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD2O14647 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.18■■■□□ 2.42
CHD2O14647 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.18■■■□□ 2.42
CHD2O14647 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.18■■■□□ 2.42
CHD2O14647 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.18■■■□□ 2.42
CHD2O14647 AL359736.2-201ENST00000621992 437 ntBASIC30.18■■■□□ 2.42
CHD2O14647 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.18■■■□□ 2.42
CHD2O14647 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD2O14647 AC004812.2-201ENST00000611079 2094 ntBASIC30.18■■■□□ 2.42
CHD2O14647 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD2O14647 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.17■■■□□ 2.42
CHD2O14647 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CHD2O14647 AC073648.6-201ENST00000641589 218 ntBASIC30.17■■■□□ 2.42
CHD2O14647 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.17■■■□□ 2.42
CHD2O14647 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD2O14647 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.17■■■□□ 2.42
CHD2O14647 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD2O14647 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD2O14647 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms