Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK2O00526 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPK2O00526 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK2O00526 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK2O00526 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
UPK2O00526 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
UPK2O00526 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK2O00526 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPK2O00526 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK2O00526 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK2O00526 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK2O00526 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK2O00526 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK2O00526 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK2O00526 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK2O00526 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
UPK2O00526 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK2O00526 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK2O00526 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK2O00526 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK2O00526 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK2O00526 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UPK2O00526 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
UPK2O00526 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
UPK2O00526 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
UPK2O00526 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
UPK2O00526 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPK2O00526 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK2O00526 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
UPK2O00526 SLC47A1P1-202ENST00000449666 945 ntBASIC17.14■□□□□ 0.33
UPK2O00526 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.14■□□□□ 0.33
UPK2O00526 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK2O00526 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
UPK2O00526 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPK2O00526 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK2O00526 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UPK2O00526 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK2O00526 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK2O00526 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 FEM1AP4-201ENST00000443167 1987 ntBASIC17.13■□□□□ 0.33
UPK2O00526 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK2O00526 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 AC131281.2-201ENST00000520478 145 ntBASIC17.13■□□□□ 0.33
UPK2O00526 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK2O00526 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK2O00526 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK2O00526 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK2O00526 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UPK2O00526 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UPK2O00526 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK2O00526 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK2O00526 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 AP004607.7-201ENST00000527152 1677 ntBASIC17.12■□□□□ 0.33
UPK2O00526 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
UPK2O00526 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK2O00526 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK2O00526 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK2O00526 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK2O00526 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK2O00526 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK2O00526 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms