Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX39AO00148 AP006587.3-201ENST00000525742 1516 ntBASIC24.12■■□□□ 1.45
DDX39AO00148 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX39AO00148 AC137761.2-201ENST00000561729 223 ntBASIC24.12■■□□□ 1.45
DDX39AO00148 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.12■■□□□ 1.45
DDX39AO00148 AC145350.3-201ENST00000569033 163 ntBASIC24.12■■□□□ 1.45
DDX39AO00148 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX39AO00148 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX39AO00148 KRT87P-202ENST00000534226 1464 ntBASIC24.12■■□□□ 1.45
DDX39AO00148 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX39AO00148 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX39AO00148 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX39AO00148 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX39AO00148 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.11■■□□□ 1.45
DDX39AO00148 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.11■■□□□ 1.45
DDX39AO00148 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX39AO00148 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
DDX39AO00148 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
DDX39AO00148 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX39AO00148 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX39AO00148 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX39AO00148 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX39AO00148 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.1■■□□□ 1.45
DDX39AO00148 AC104187.1-201ENST00000607510 612 ntBASIC24.1■■□□□ 1.45
DDX39AO00148 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX39AO00148 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
DDX39AO00148 AC233723.2-201ENST00000623798 2106 ntBASIC24.1■■□□□ 1.45
DDX39AO00148 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
DDX39AO00148 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX39AO00148 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX39AO00148 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX39AO00148 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX39AO00148 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX39AO00148 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX39AO00148 AC016769.1-201ENST00000409132 1010 ntBASIC24.08■■□□□ 1.45
DDX39AO00148 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX39AO00148 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX39AO00148 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX39AO00148 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX39AO00148 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX39AO00148 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.08■■□□□ 1.44
DDX39AO00148 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX39AO00148 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.08■■□□□ 1.44
DDX39AO00148 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
DDX39AO00148 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX39AO00148 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.08■■□□□ 1.44
DDX39AO00148 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
DDX39AO00148 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX39AO00148 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX39AO00148 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX39AO00148 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX39AO00148 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX39AO00148 KRT19P1-201ENST00000405746 1186 ntBASIC24.07■■□□□ 1.44
DDX39AO00148 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.07■■□□□ 1.44
DDX39AO00148 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX39AO00148 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
DDX39AO00148 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX39AO00148 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
DDX39AO00148 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX39AO00148 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.07■■□□□ 1.44
DDX39AO00148 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX39AO00148 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.06■■□□□ 1.44
DDX39AO00148 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX39AO00148 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX39AO00148 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.06■■□□□ 1.44
DDX39AO00148 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
DDX39AO00148 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX39AO00148 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX39AO00148 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.06■■□□□ 1.44
DDX39AO00148 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX39AO00148 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.06■■□□□ 1.44
DDX39AO00148 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX39AO00148 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
DDX39AO00148 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DDX39AO00148 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.05■■□□□ 1.44
DDX39AO00148 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX39AO00148 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX39AO00148 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX39AO00148 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX39AO00148 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms