Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM49D1C9J1S8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TRIM49D1C9J1S8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 AC099791.2-201ENST00000605725 427 ntBASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49D1C9J1S8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 AL157384.1-201ENST00000445995 2473 ntBASIC21.4■■□□□ 1.02
TRIM49D1C9J1S8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49D1C9J1S8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49D1C9J1S8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM49D1C9J1S8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 AC068587.7-201ENST00000641602 218 ntBASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49D1C9J1S8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49D1C9J1S8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms