Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 LINC01521-201ENST00000504184 1943 ntBASIC21.86■■□□□ 1.09
SMIM23A6NLE4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 KRT8P33-201ENST00000508125 1423 ntBASIC21.85■■□□□ 1.09
SMIM23A6NLE4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM23A6NLE4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM23A6NLE4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 MIR4508-201ENST00000584178 70 ntBASIC21.83■■□□□ 1.09
SMIM23A6NLE4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM23A6NLE4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMIM23A6NLE4 LINC01006-201ENST00000333319 2292 ntBASIC21.82■■□□□ 1.08
SMIM23A6NLE4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM23A6NLE4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 TSPY13P-201ENST00000338964 914 ntBASIC21.81■■□□□ 1.08
SMIM23A6NLE4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM23A6NLE4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 MIR6722-201ENST00000617286 78 ntBASIC21.8■■□□□ 1.08
SMIM23A6NLE4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM23A6NLE4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 AC103834.1-201ENST00000520383 144 ntBASIC21.79■■□□□ 1.08
SMIM23A6NLE4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 AC103724.3-201ENST00000564481 992 ntBASIC21.79■■□□□ 1.08
SMIM23A6NLE4 AC009102.2-201ENST00000606772 1639 ntBASIC21.79■■□□□ 1.08
SMIM23A6NLE4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM23A6NLE4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM23A6NLE4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms