Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 AP006587.3-201ENST00000525742 1516 ntBASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D3BA6NDS4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 AC137767.1-201ENST00000602918 1920 ntBASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 AL050303.2-201ENST00000619798 666 ntBASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D3BA6NDS4 AC087742.1-201ENST00000575880 1738 ntBASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D3BA6NDS4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TBC1D3BA6NDS4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TBC1D3BA6NDS4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D3BA6NDS4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 EEF1DP3-203ENST00000566025 782 ntBASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 AC053503.5-201ENST00000601508 636 ntBASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 AC010536.3-201ENST00000620306 533 ntBASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D3BA6NDS4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D3BA6NDS4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 TSPY6P-201ENST00000448518 926 ntBASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TBC1D3BA6NDS4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms