Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 AL136162.1-201ENST00000607711 1078 ntBASIC19.31■□□□□ 0.68
TMEM129A0AVI4 AC005837.3-201ENST00000612163 286 ntBASIC19.31■□□□□ 0.68
TMEM129A0AVI4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM129A0AVI4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 DUX4L19-201ENST00000557448 1267 ntBASIC19.3■□□□□ 0.68
TMEM129A0AVI4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM129A0AVI4 AF106564.1-201ENST00000607058 2553 ntBASIC19.3■□□□□ 0.68
TMEM129A0AVI4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 AC024257.2-201ENST00000549699 147 ntBASIC19.29■□□□□ 0.68
TMEM129A0AVI4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM129A0AVI4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 AC092171.4-201ENST00000609130 632 ntBASIC19.28■□□□□ 0.68
TMEM129A0AVI4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 AL121603.2-201ENST00000557373 2117 ntBASIC19.28■□□□□ 0.68
TMEM129A0AVI4 AC004687.1-201ENST00000579003 1625 ntBASIC19.28■□□□□ 0.68
TMEM129A0AVI4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM129A0AVI4 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.68
TMEM129A0AVI4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TMEM129A0AVI4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
TMEM129A0AVI4 AL157384.1-201ENST00000445995 2473 ntBASIC19.27■□□□□ 0.67
TMEM129A0AVI4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM129A0AVI4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM129A0AVI4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM129A0AVI4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM129A0AVI4 AC135279.3-201ENST00000610945 1311 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms