Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV21A0A0B4J279 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 UNC93B8-201ENST00000511903 705 ntBASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 AC005229.4-201ENST00000610085 2198 ntBASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV21A0A0B4J279 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 KRT16P3-201ENST00000439127 1283 ntBASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV21A0A0B4J279 AL024507.2-201ENST00000606070 2574 ntBASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 AL356740.2-201ENST00000601559 647 ntBASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV21A0A0B4J279 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 AC006455.2-201ENST00000429931 906 ntBASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 AC099791.2-201ENST00000605725 427 ntBASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 AC092171.4-201ENST00000609130 632 ntBASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV21A0A0B4J279 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms