Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 MIR3960-201ENST00000583311 91 ntBASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 MED25-210ENST00000612854 801 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 MED25-214ENST00000622402 642 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 ALDH1A3-203ENST00000557963 1670 ntBASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRAV22A0A0B4J277 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRAV22A0A0B4J277 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
TRAV22A0A0B4J277 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRAV22A0A0B4J277 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 AC087742.1-201ENST00000575880 1738 ntBASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV22A0A0B4J277 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 EI24-204ENST00000527235 1625 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV22A0A0B4J277 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 Z98882.1-201ENST00000622160 2253 ntBASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms