Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV25A0A0B4J276 AP006587.3-201ENST00000525742 1516 ntBASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 AC080038.3-201ENST00000623346 1952 ntBASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 GUSBP5-202ENST00000510805 1989 ntBASIC16.09■□□□□ 0.17
TRAV25A0A0B4J276 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
TRAV25A0A0B4J276 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV25A0A0B4J276 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 ECEL1P1-201ENST00000373592 1742 ntBASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV25A0A0B4J276 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV25A0A0B4J276 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L2-201ENST00000561772 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L6-201ENST00000626483 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L1-201ENST00000627662 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L8-201ENST00000629013 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L3-201ENST00000630187 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L7-201ENST00000630678 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 DUX4L5-201ENST00000630834 1275 ntBASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV25A0A0B4J276 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 KRT87P-202ENST00000534226 1464 ntBASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV25A0A0B4J276 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms