Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AC010525.1-201ENST00000585559 441 ntBASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 SERBP1P1-201ENST00000396021 1160 ntBASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 AC131281.2-201ENST00000520478 145 ntBASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-3A0A0B4J271 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-3A0A0B4J271 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 AC010141.3-201ENST00000456659 717 ntBASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 AL138724.1-201ENST00000606771 1088 ntBASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV12-3A0A0B4J271 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV12-3A0A0B4J271 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 AL136116.3-201ENST00000402907 1138 ntBASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-3A0A0B4J271 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-3A0A0B4J271 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-3A0A0B4J271 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms